Gene Daci_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4021 
Symbol 
ID5749608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4431332 
End bp4432006 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID641299123 
Producthypothetical protein 
Protein accessionYP_001565037 
Protein GI160899455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.418667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.145684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAT ATATCCCTTC CCGCCTGGCC ATTGCCGCCA TCACCTGCGC AATGGCTGTT 
CCGGCTTTTG CGCATGGGGG AGGCGGGCAC GCCATGGGTC ACGGGCCCGG CATGGCGGGC
GGGCATTCCA TGCCGGCACA GTTCGACCAC AGATATGGCC ACGACCACTA CTATCCGGCC
CGCGGCACCT GGGTGTCCGG CCTGCCGGCC GGCAGCCTGA GCGTCGCCTA TGGCCGCGCC
AACTGGTATT TCCACAGTGG CATCTGGTAC CGGCCCTATG GCTCGGCCTT CATCGTGAGC
CTGCCGCCGC TGGGCATCGT CGTGCCGCTG CTGCCGCCGG CCTACACCAC GGTCTGGCTG
GATGGCAGCA CCTACTACTA TGCCAACGGC ATCTACTACA GCGCAGCGCC TGGCGGCTAT
ACCGTGGTCG CGCCCCCGCC CGATGCAGGA TCGGCCCAGG TCATGCCGGA CCAGTCCGTG
CCGATGCCCG TGCCCGAATC CCTGGTCGAT CCGGTCATCT ACCCGCGGGC TGGCCAGGGG
CAGGCCCAGA CCGATGCCGA CAGGCAGGCC TGCCAGCAAT GGGCCATGGC CCAGCCAGGA
GCCGAGGTTG ATGCCGGCGT GCAGCAGCGC GGACTGGCTG CCTGCATGGA TGCCCGCGGC
TACACGGTGC GCTGA
 
Protein sequence
MLAYIPSRLA IAAITCAMAV PAFAHGGGGH AMGHGPGMAG GHSMPAQFDH RYGHDHYYPA 
RGTWVSGLPA GSLSVAYGRA NWYFHSGIWY RPYGSAFIVS LPPLGIVVPL LPPAYTTVWL
DGSTYYYANG IYYSAAPGGY TVVAPPPDAG SAQVMPDQSV PMPVPESLVD PVIYPRAGQG
QAQTDADRQA CQQWAMAQPG AEVDAGVQQR GLAACMDARG YTVR