Gene Daci_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4020 
Symbol 
ID5749607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4429396 
End bp4431318 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content66% 
IMG OID641299122 
ProductK potassium transporter 
Protein accessionYP_001565036 
Protein GI160899454 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0241257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.195504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA CCCCCGGTTC CGGACAAGGA CAGTGCAGCC CGCAGCCCGT GCCAGCCCGC 
CGCACGGCCC TGCCCGCGCT GACGCTGGGG GCCCTGGGCG TCGTCTATGG AGACATAGGC
ACCAGCCCGC TGTACACGCT GCAGGCTGTC TTCGGCCCCG ACACCGGCCT GTCCGTGGCG
CCGGAGCATG TCGTCGGCGC CATCTCGACC ATCTTCTGGG CGCTCATGCT GGTGGTGACG
CTGAAGTACG TGATCCTGGT ACTGCGGGCC GACAACCGGG GAGAAGGCGG CATCCTGGCA
CTGGCCTCGC TGGCGGCCCA TGGCGGCGAC GGTGGGGCCC GGCCTCGGCG CGCCGCACTG
CTGCTGATGG GCGTGGCAGG GGCAACGCTG TTTTATGGCG ACAGCGTGAT CACGCCCGCC
ATCTCCGTCC TGGGCGCGGT GGAGGGCCTG CAGGTGGTGG CGCCTGCAGT GAGCGAATGG
GTGCTGCCGA TTGCCGTGTG CGTGCTATCG GCGCTGTTTG CCATCCAGCG CTGGGGCACG
GGCACCGTGG GCAAGGCTTT CGGCCCGGTG ATGCTGCTGT GGTTCGGCGT GCTGGCCGTC
TCGGGACTGG TGCATGTGAT CCGGGAACCG GCCATCCTGG CAGCCCTCAA CCCGCTTGAA
GCCTGGCAGT TCCTGCAGGC CAGGGGCTGG AAGCTGTTCG CGCTGATGGG AGCCATTGTC
CTGGCATTGA CGGGGGCCGA AGCCCTGTAC GCCGATCTCG GACATTTTGG CCGCCGCCCC
ATACAACTGG CCTGGACAGT GCTGGTGCTG CCGTCGCTGG CCCTGAACTA CATGGGTCAG
GGCGCATTGC TGATGAGCAC GCCGGCGGCG GTGGACAATC CGTTCTTCCG CATGTTCCCG
CAAGCCCTGG CGCTGCCCAT GGTCGTCCTG GCCACGCTGG CCGCCGTGAT CGCCTCGCAG
GCGGTGATCT CGGGCGCCTA TTCCATGACG CGGCAGGCCA TACAGCTGGG CTTTCTGCCG
CGCCTGTCCG TGCGCTTCAC ATCCGCCCAG GATTCCGGCC AGATCTACAT GCCCGCGGTC
AACAGCCTGC TGCTGGTGGC CGTGGTCCTG GCGGTGCTGA GCTTTCGCTC CTCCAGCGCC
CTGGCCGGAG CCTACGGTAT TGCCGTGACG CTGACCATGC TGCTGACAAC GGTGCTGGCC
TGGCATGCGG CGCGCGCGCG CTGGCCCGGG CGCGCCGGCG TGCTCACGCT GGCGGCCCTG
CCCTTTGCCG TGATTGACCT GCTGCTGGTT GCAGGATGCT CGGTCAAGCT GTTCGATGGC
GGCTGGTTCC CGCTGGGCCT GGGCATGCTG CTGTTCATTC TGATGAGCAC CTGGTCCTGG
GGACGGGCCC GGCTGCTGCA GACCGAGCGC GAACAAGGCA TCGCCCTTGG CGATTTCCTG
CAGACGGCCG ACATTGCCGA CATCCACCGC GCCCAGCGGA TTGCGCTGTA CCTTGTGAAC
AACCCCACCA TGGTGCCCAA TGCCCTGCTG CACAACATGA AGCACAACCA GGTGCTGCAC
AAGCACAACC TGATCGTCCA TGTCCGCTTC CACGAGGAGC CCTGGGTTCG CATGGACGAG
CGCATCGAAA GCCAGAGCCT GGGCCATGAC TTCTGGCGCA TCACGGTGCA CTACGGATTC
ATGAACGTGC CTGACGTGCC CAAGGCCCTG GCGCTGCTGG ACATTCCGGG CATCGATACG
GCATCGCTGC ACGCCAGCTG GTTTCTCAGC CACCCGACGC TGGTCGCGGA AAAAGGACAT
GGCCTGTCCC ACTGGAGAAG CCATGTCTTC GTGGGCATGA GCCGCCTGTC GGGCAGCGCC
TCCCACTTCT TTCGCTTGCC CGACAACGCG GTCATCGAGC TGGGCAACCG CGTCCAGCTA
TGA
 
Protein sequence
MNATPGSGQG QCSPQPVPAR RTALPALTLG ALGVVYGDIG TSPLYTLQAV FGPDTGLSVA 
PEHVVGAIST IFWALMLVVT LKYVILVLRA DNRGEGGILA LASLAAHGGD GGARPRRAAL
LLMGVAGATL FYGDSVITPA ISVLGAVEGL QVVAPAVSEW VLPIAVCVLS ALFAIQRWGT
GTVGKAFGPV MLLWFGVLAV SGLVHVIREP AILAALNPLE AWQFLQARGW KLFALMGAIV
LALTGAEALY ADLGHFGRRP IQLAWTVLVL PSLALNYMGQ GALLMSTPAA VDNPFFRMFP
QALALPMVVL ATLAAVIASQ AVISGAYSMT RQAIQLGFLP RLSVRFTSAQ DSGQIYMPAV
NSLLLVAVVL AVLSFRSSSA LAGAYGIAVT LTMLLTTVLA WHAARARWPG RAGVLTLAAL
PFAVIDLLLV AGCSVKLFDG GWFPLGLGML LFILMSTWSW GRARLLQTER EQGIALGDFL
QTADIADIHR AQRIALYLVN NPTMVPNALL HNMKHNQVLH KHNLIVHVRF HEEPWVRMDE
RIESQSLGHD FWRITVHYGF MNVPDVPKAL ALLDIPGIDT ASLHASWFLS HPTLVAEKGH
GLSHWRSHVF VGMSRLSGSA SHFFRLPDNA VIELGNRVQL