Gene Daci_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3985 
Symbol 
ID5749568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4391627 
End bp4392427 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID641299083 
Productglutaredoxin 
Protein accessionYP_001565001 
Protein GI160899419 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.28691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.032093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCT ATGCTTGCAG GCACTCCTGT GCGGGCATCC ATCCGACGAG TGGTGGCCCC 
CGGCACGAAA CCCTTCTTCC GAAACCGAGA TCGTCCATGC AGTCTTCTCC CAGCCTTGGC
CGCGGCGCCC TGCGCCACCT GATGCCATGC CTCGCCCTCG TCTGCCTCGC TGCCGCGCTG
CCGGCCAGCG CACAACAGGT CTACCGTATC GTCGGGCCCG ATGGAAAAGT CACCTTCTCG
GACCGCCCGG CCCAAAGCGC CCAGCAGCAG GCAGCGCCTG CCGCCCCTGC CGCCCCGTCA
GTCGCGGGCA CCACTGACAG CAATGCCAAC CTGCCCTATG CGCTGCGCCA GATCGCAGGC
CGCTTTCCGG TGACGCTGTA CACCTCGTCC GACTGCGCGC CCTGCGACAG CGCGCGCCAG
TTGCTGCAAT CCAGAGGCAT TCCCTATGCC GAACGCCTGG TGCAGACCGA GGCGGACGCC
GCTGCCCTGC AAAAGCTCAG CGGCCAGAAC AGCCTGCCGT TCGCCACCGT TGGCAAGCAG
TTCCTGAGCG GCTTCTCGTC CAGCGAATGG ACTCAGTACC TGGATGCCGC AGGCTATCCT
GCGACCTCGC AACTGCCGGC CCAGTACAAG CGGCCATCGG CACAGCCATT GACCACGCCT
GCGCCCGCTG CATCGGCGGC GGCATCGGCG CCCGCAGCAG CACCCGCCGC TGCCGAGGCG
CCGGGCAGCC GGCGCACCCC CATGCCCGCC CCAGCGCCTG GTGCACGCAC CAACGACAAC
CCCGCAGGCC TGAGCTTCTA G
 
Protein sequence
MARYACRHSC AGIHPTSGGP RHETLLPKPR SSMQSSPSLG RGALRHLMPC LALVCLAAAL 
PASAQQVYRI VGPDGKVTFS DRPAQSAQQQ AAPAAPAAPS VAGTTDSNAN LPYALRQIAG
RFPVTLYTSS DCAPCDSARQ LLQSRGIPYA ERLVQTEADA AALQKLSGQN SLPFATVGKQ
FLSGFSSSEW TQYLDAAGYP ATSQLPAQYK RPSAQPLTTP APAASAAASA PAAAPAAAEA
PGSRRTPMPA PAPGARTNDN PAGLSF