Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3955 |
Symbol | |
ID | 5749538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4354251 |
End bp | 4357478 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641299053 |
Product | acriflavin resistance protein |
Protein accession | YP_001564971 |
Protein GI | 160899389 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.542775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.203686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTTCA CGCGCGTCAG CCTGGCCAAC CCTGTGTTCG CCACCATGCT CATGCTGGCC CTCATGGTGC TGGGTGTGTT TTCCTACCAG CGACTCAAGG TGGACCAGTT CCCGAATGTG GACTTCCCCG TGGTCGTGGT CACGGTGGAC TATCCGGGCG CCTCGCCCGA GATCGTGGAG TCCGAGGTCA CCAAGAAGAT CGAGGAAGGC GTCAACTCCA TTGCCGGCAT CAACGCACTG ACCTCGCGCA GCTATGAGAG CACCAGCGTC GTCATCATCG AATTCCAATT GCATGTCGAT GGCCGCCGCG CTGCCGAAGA CGTGCGCGAG AAGGTGGCCT CGGTGCGCCC CACCCTGCGC GACGAGGTCA AGGAGCCGCG CGTGCTGCGC TTCGATCCGG CCAGCTCGCC CATCTGGTCC GTGGCCGTGC TGCCCCAGGC CGATGCCGGC GCCAAGGCGC CCGATGCCGT CGCGCTGACC AGCTGGGCCG ACCAGGTCCT CAAGAAACGG CTGGAGAATG TGCGCGGCGT GGGCGCCGTC AACCTGGTGG GCGCCACGCC GCGCGAGATC AACATCTACC TGCAGCCCGA GGCGCTGGAA GCCTATGCCA TCACGCCCGA CCAGATCGTG AACGCCGTGC GCAGCGAGAA CCAGGACCTG CCGCTGGGCG CCATCCGCTC GCGCGAGCAG GAGCGCGTGG TGCAGATCGA CGCACGCATG AAGCGCCCGC AGGACTTCGA GCGCATCATC GTCGCCCAGC GCGGCGGCGC TCCCGTGCGG CTGGGCCAGC TGGCGCGCGT GCAGGACGGC GCGGGCGAAC TGGAAACCGT GGCCCTGTAC AACAGCAGCC GCACCCTGCT GCTGTCCGTG CAAAAGGCCC AGGACGAGAA CACCATCGAA GTCGTGGACG GCCTGAACGC CACGCTGCGC GAGATCGCCG CCGAAGTGCC GGCCGGCGTG CGGCTGGAGC CGATTGCCGA CAGCGCCCGC CCCATCCGCG TGGCCGTCAA CAACGTGCGC CAGACGCTGA TCGAGGGCGC GGCACTGACG GTGCTCATCG TCTTCCTGTT CCTGAACTCC TGGCGCTCCA CGGTGATCAC GGGGCTGACG CTGCCGATTG CGCTGATCGG CACCTTTTTG TTCATGTATT GGTTCGGCTT CTCGATCAAC ATGATCACGC TGATGGCGCT GTCGCTGTGC GTGGGCCTGC TGATCGACGA CGCCATCGTG GTGCGCGAGA ACATCGTGCG CCATGTGCAG ATGGGCAAGG ACGCGCATGC CGCCGCGCTG GACGGCACGC AGGAGATCGG CCTGGCCGTG CTGGCCACCA CGCTGTCCAT CGTGGCGGTG TTCCTGCCCA TCGGCTTCAT GGGCGGCATC ATCGGCAAGT TCTTCCACGA ATTCGGCATC ACGATCGTGG CGGCCGTGAT GATCTCCATG TTCGTGAGCT TCACGCTGGA CCCCATGCTC TCCAGCGTCT GGCATGACCC GACCATCCAC GCCCATGGCG AGCAGCGCGG CCGCAGCCTC TACGACCGCA CGCTGGGCCG GGTCACGGCC TGGTTCGAGC GCGCCACCGA CTCGCTGTCC CACTTCTACC AGGACGTGCT GGGCTGGGCG CTGCGCCACA AGATCACCAC GCTGGCGGCG GCGCTGGCCA TCTTCGTGGC CAGCATCTTC CTGGTGCCGC TGCTGGGCAC GGAATTCGTG CCCAAGGCCG ACTTCTCGGA AACCACGGTG AGCTTCAACA CGCCCGTGGG CTCGTCCATC GAGGCCACGG AGGCCAAGGC CCGCCAGGTC GATGCCATCA TCCGCGCCCT GCCCGAGGTC CGCTACACGC TGGCCACCAT CAACACCGGC ACGGCCCAGG GCAAGATATA CGCCAGCATC TACATCCGCC TGCTGGACCG CCACCTGCGC CAGCGCAGCG GCGATGAACT GTCGGGCGTG CTGCGCGAGC AGCTGCAAAG CGTGCCCGGC ATCACCGTCA CCCATGTGGG CCAGCGCGAG CCCGTGGGCG GGCAAAAACA GGTCGAATTC TCACTGCAGG GCCCGGACCT GGGCGAGCTG GAGCGCCTGA ACCGCGTGGT GATGGAACGC CTGCGCGGCA TTCCCGGACT GGTGGACCTG GACAGCAACC TCAAGCCCGA CAAGCCCGTG ATCGACATCA CCGTGCGGCG CGATGCGGCC GCCGACCTGG GCCTGTCGGT AGGCTCCATG GCAACGGCTC TGCGCACCTG GGTGGCCGGC CAGACCGTGG GCAACTGGCG CGCCAGCGAC GACCAGACCT ATGACGTCAA GGTGCGCCTG GCGCCCGAGT CGCGCAGCAC GCCCCAGGAC CTGGAGCGGC TGCCCTTCGC CCTGCCCTCC ACCTCGGGCG ACGGCGGCAT GCGCATCGTG CGGCTGAACC AGGTGGCCAC CGTCACGCCC AGCACCGGCC CCAGCCAGAT CAACCGCCGC GACATGACGC GCGAGGTCGC CTTCAGCGGC AACGTCTACC TGCGCTCCAG CGGCGAGGTC TCGGCCGACA TCCTCAATGC CTTGGCCGAC ATCGCCCTGC CACCCGGCTA CCGCACGCAG TTCAGCGGCG CCACCAAGAG CATGAACGAA TCGTTCGGCT ATGCGGTGTC CGCCCTGGCG CTGGCCATCA TCTTCATCTA CATGATCCTG GCCAGCCAGT TCAAGAGCTT CCTGCAGCCG CTGGCGTTGA TGACCTCGCT GCCGCTGACG CTGATCGGCG TGGTGCTGGC GCTGATGATG TTCGGCTCGG CCCTGTCCAT GTTCTCCATC ATCGGCGTGG TCATGCTCAT GGGACTGGTC ACCAAGAACG CCATCTTGCT GGTGGACTTC GCCATCCGCG CGCGCGGGCC GCACAGCGAC CCGGACACCG GCCAGATCCG CGACGGCCTG CCGCGCGAGC AGGCCCTGCT GCTGGCAGCA CGCGTGCGGC TGCGCCCCAT TCTGATGACC ACGCTGGCCA TGATCTTCGG CATGGTGCCG CTGGCCTTCG CGCTCAGCGA AGGCTCCGAG CAGCGCGCGC CCATGGGCCA GTCGGTGATC GGCGGCGTGG TCACCTCGTC GCTGCTGACC CTGGTGGTCG TGCCCGTGGT CTATTGCTAC CTTGACGACT TCTCCCAGTG GCTGCGGCGC CTGTGGAACG GCAACCGGCA CGACGCGGCA CCCGGCCAAG GCGCCGCCAG CGCCCCCACC CCGCCGCGAG ACTCGTAG
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Protein sequence | MWFTRVSLAN PVFATMLMLA LMVLGVFSYQ RLKVDQFPNV DFPVVVVTVD YPGASPEIVE SEVTKKIEEG VNSIAGINAL TSRSYESTSV VIIEFQLHVD GRRAAEDVRE KVASVRPTLR DEVKEPRVLR FDPASSPIWS VAVLPQADAG AKAPDAVALT SWADQVLKKR LENVRGVGAV NLVGATPREI NIYLQPEALE AYAITPDQIV NAVRSENQDL PLGAIRSREQ ERVVQIDARM KRPQDFERII VAQRGGAPVR LGQLARVQDG AGELETVALY NSSRTLLLSV QKAQDENTIE VVDGLNATLR EIAAEVPAGV RLEPIADSAR PIRVAVNNVR QTLIEGAALT VLIVFLFLNS WRSTVITGLT LPIALIGTFL FMYWFGFSIN MITLMALSLC VGLLIDDAIV VRENIVRHVQ MGKDAHAAAL DGTQEIGLAV LATTLSIVAV FLPIGFMGGI IGKFFHEFGI TIVAAVMISM FVSFTLDPML SSVWHDPTIH AHGEQRGRSL YDRTLGRVTA WFERATDSLS HFYQDVLGWA LRHKITTLAA ALAIFVASIF LVPLLGTEFV PKADFSETTV SFNTPVGSSI EATEAKARQV DAIIRALPEV RYTLATINTG TAQGKIYASI YIRLLDRHLR QRSGDELSGV LREQLQSVPG ITVTHVGQRE PVGGQKQVEF SLQGPDLGEL ERLNRVVMER LRGIPGLVDL DSNLKPDKPV IDITVRRDAA ADLGLSVGSM ATALRTWVAG QTVGNWRASD DQTYDVKVRL APESRSTPQD LERLPFALPS TSGDGGMRIV RLNQVATVTP STGPSQINRR DMTREVAFSG NVYLRSSGEV SADILNALAD IALPPGYRTQ FSGATKSMNE SFGYAVSALA LAIIFIYMIL ASQFKSFLQP LALMTSLPLT LIGVVLALMM FGSALSMFSI IGVVMLMGLV TKNAILLVDF AIRARGPHSD PDTGQIRDGL PREQALLLAA RVRLRPILMT TLAMIFGMVP LAFALSEGSE QRAPMGQSVI GGVVTSSLLT LVVVPVVYCY LDDFSQWLRR LWNGNRHDAA PGQGAASAPT PPRDS
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