| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3954 |
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| Symbol | |
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| ID | 5749537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4353007 |
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| End bp | 4354248 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299052 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001564970 |
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| Protein GI | 160899388 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0763531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0766825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GCACCGGCTG GCTGATCTGC CTGGCCTTAT TGATCGCCAT CGGCGCCAGC
GTATGGCGCG CCGCATCCAC CCGGCACAGC AAGCAAAGCG CCATCGCCGC AGCCACCCAG
CCGCGCGAGA TGCCGGTGCG CGTGGGTCCG CAGGAAGTGG TGCAGTTGCA GCCGCGCCAG
CTGCAATTGA CCGTGCCAGT CAGCGGCGTG GTGCAGGCCG TGCGCAGCGC CGTGGTCAAG
GCCTATGTGG CCGGCGAGCT GCGCGGCCTG CAGGTGCGCG AGGGCGACAG CGTGCGCAAG
GGCCAGGAAC TGGCCCGCGT GGACGCCACC GAGGTCGAGG CCCGCTGGCG CCAGACCCGC
CAGCAGGCCG ACGCGGCCCA GGCGCAGCTG CAGCTATCCC AGCGCCAGCA CGACAACAAC
CAGGCCCTGG TCACGCAAGG CTTCATTTCG ACCACGGCGC TGGCCACCTC CCAATCCAAC
CTCGATGCCG CACGCGCCAA CCTGGCCGCT GCCCAGGCCG CCGCCGATGT GGCCCGCAAG
AGCGTGACCG ACAGCGTGCT GCGCAGTCCC ATGGACGGGC AGGTCGCGCA GCGCCTGGTG
CAGGACGGCG AGCGCGTGGG CGTGGAAACG CGGGTGCTGG AGATCGTCGA TCCGTCCGAC
CTCGAAGTCG TGGCCCAGCT GGCGCCCGCC GATTCGGTGC GCGTGCAGGT CGGCCAGCAG
GCACTGTTGC AGGTTCAGGG TGCGGGCGAC GATGTGGCCG CCGTGCCCGC GCGCGTGGTG
CGCATCAACC CCAGCGCCCA GGCAGGTTCG CGCAGCGTGG CCGTCTATCT GCGTGTGCAG
GCTGCACCGG TCAACGCAGG CGCCGCCGGC AGATCCATCC CCATCGTGCG CCCGGGCCTG
TACCTGCAGG GCAGCATTGT CACGGGGCAG ACCGAACAGT TGGCCGTGCC CCTGACCGCC
GTGCGCACCG ACCAGCCCCA GCCCTATGTA CAGCTGCTGC AGCCTGCGGG CGAGTCCGAT
GCGGACAAGA GCCTGCTGCG CGTGCAGCAC CGCCCGGTCA CGCTGGGCAG CCAGAGCGCG
CAGGATGGCG CCACCTGGAT TGCCGTATCC ACCGGCCTGC AGGCCGGTGA CCGGGTGCTG
GCCGGCAGTG TGGGCGGCCT GCGCGCAGGC ACGGCGGTGC AGATGCAGCA AATGCAGCAG
GCCCCGCAGT CCCTGGCTGC GCCAGCCCCC GGAGCCCGCT GA
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| Protein sequence | MKRRTGWLIC LALLIAIGAS VWRAASTRHS KQSAIAAATQ PREMPVRVGP QEVVQLQPRQ
LQLTVPVSGV VQAVRSAVVK AYVAGELRGL QVREGDSVRK GQELARVDAT EVEARWRQTR
QQADAAQAQL QLSQRQHDNN QALVTQGFIS TTALATSQSN LDAARANLAA AQAAADVARK
SVTDSVLRSP MDGQVAQRLV QDGERVGVET RVLEIVDPSD LEVVAQLAPA DSVRVQVGQQ
ALLQVQGAGD DVAAVPARVV RINPSAQAGS RSVAVYLRVQ AAPVNAGAAG RSIPIVRPGL
YLQGSIVTGQ TEQLAVPLTA VRTDQPQPYV QLLQPAGESD ADKSLLRVQH RPVTLGSQSA
QDGATWIAVS TGLQAGDRVL AGSVGGLRAG TAVQMQQMQQ APQSLAAPAP GAR
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