Gene Daci_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3951 
Symbol 
ID5749534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4351017 
End bp4351514 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content72% 
IMG OID641299049 
Productferric uptake regulator family protein 
Protein accessionYP_001564967 
Protein GI160899385 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.781008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0311151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC CGACCCCCAC TTCCCTGCCC ATACCTGCCG GCATGCGTTC GACGCGTGCC 
ACGCGGGCCG TGCTGGCGAT GTGGGAGTCG CGGGCCGACG CACTCCTGAG CGAAGCCGAT
GTGGAAGCGG CCCTGCACGC CCAGGGCGTG GAGGTCAACC GCGTCACCGT CTACCGGCTG
CTGGACCGCC TGGCGGCAGC CGGTGTGTTG CGCCGCAGCG TGGATGCTGC CCGCGTGGCC
CGCTACGGCC GGTCCGTGCC GGGCGCAGGC AGGCAGGCCG ATGCCGCTGC GCATTTCGAA
TGCGCGGACT GCCACAGCGC TTTTCGGCTG GGCGGCGAGG GCGGTGGGGG CGGCGAGCCG
CTGCAGGCCG CTTTGCTGCA GCTGCACCAG GCGCTGGCCG CCAGTGGCCT GCAGGGCCGG
GCCATCGATG TGGCGGTGAC AGGGCTGTGC CAGGACTGCA GCAGTGCAGG GCCATCCCGA
AATACCCCGT CCGCCTGA
 
Protein sequence
MSLPTPTSLP IPAGMRSTRA TRAVLAMWES RADALLSEAD VEAALHAQGV EVNRVTVYRL 
LDRLAAAGVL RRSVDAARVA RYGRSVPGAG RQADAAAHFE CADCHSAFRL GGEGGGGGEP
LQAALLQLHQ ALAASGLQGR AIDVAVTGLC QDCSSAGPSR NTPSA