| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3947 |
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| Symbol | |
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| ID | 5749530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4346550 |
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| End bp | 4347611 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299045 |
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| Product | integrase family protein |
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| Protein accession | YP_001564963 |
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| Protein GI | 160899381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.859516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.187137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAT CACCATCTCA GGCACCCGCT GCCGGCAAGT CGCCGTCCAC TGTCCCCGAC
GGACTGGCCC TGTTCCGGCA TTGGCTGGAA ACCGAGGGCG CCAAGGGCTG GGATGCCCTG
GACACGGCAC CCGACAGCGG CTACGAAAAG GTATGGCGTG CCTGGCTGCG CAGCCTGGGC
GATGTCGGCA TGTCAGCCAA AGAAGATCCC CCCTCCCCCG CCCCCCCGAA AGGCAAAGTC
AAGGCGAAGG CCCGCGCCTG GCAACAGGCC ACCGCCGTTG ATGTCCAGAA TTTCCTGCGC
CCGCGCGAAG GCCAGTTGTC GGGCCACCAG CCCGGCCGCC GCATCAGCGA GGTCACGCGC
AGGCGCTACT GGCGATTGCT GGAACGCATT TACGACCATG CGCTGGACCA CGGCTGGGTC
AGCGCCAATC CCGCCGCAGG GCTGGCGCCG CAGGAACGCC CACCTGCCGA AGACGGCCAG
GGCCATTGCC TTCCCGCGCC GCTGTGGAAT GCCCTGCCCC GCCACATACC GATGGCCGAC
GGCTTTCAGT CGGCGCGCGA CCGCGCCATC TTGCTGCTGC TGTACGAACT GGCGCTGGCG
CCCGAGGAGG TGCGCGGCCT GTGCTGGCGC GATGTGCAAT GCGCAGGACC AGGCGATGGC
CTCCCCTGTC AATTGCATAT CGATGGCGCA CGCGCCGCGC AGCAGCGCAC GCTGGATCTG
TCGGAAACGG TGGTGAAGGC GCTGCAGGAC TGGAAAGGTT TCAGCGCCGG CCAGCGCGGG
CCGCAGGCCG TTCAACCCGA TGCCACGGTC TTTTATTCGC GTGAAGGGCA GCCGCTGTCG
GTGCGCGTGC TGTTCCATGT GGCTTCACAG CTGATACAGC GTGCCCATGC CGCGCAGCCT
GCCTCGGCGC AGCAGGCGCC GCTGCACCGC GTCGGCCCGC AGGTGCTGCG CAACACGGCC
ATCGTGCAGT GGCTGCGCGC GGGCCGTGCC GAGACCGAAG TCGTGCAGTG GATAGGCGTT
GACAGCGCGC GCGCCCTGCG CCATCTGCAG CATTACCTGT AG
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| Protein sequence | MTSSPSQAPA AGKSPSTVPD GLALFRHWLE TEGAKGWDAL DTAPDSGYEK VWRAWLRSLG
DVGMSAKEDP PSPAPPKGKV KAKARAWQQA TAVDVQNFLR PREGQLSGHQ PGRRISEVTR
RRYWRLLERI YDHALDHGWV SANPAAGLAP QERPPAEDGQ GHCLPAPLWN ALPRHIPMAD
GFQSARDRAI LLLLYELALA PEEVRGLCWR DVQCAGPGDG LPCQLHIDGA RAAQQRTLDL
SETVVKALQD WKGFSAGQRG PQAVQPDATV FYSREGQPLS VRVLFHVASQ LIQRAHAAQP
ASAQQAPLHR VGPQVLRNTA IVQWLRAGRA ETEVVQWIGV DSARALRHLQ HYL
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