| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3937 |
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| Symbol | |
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| ID | 5749520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4336085 |
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| End bp | 4339015 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641299035 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_001564953 |
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| Protein GI | 160899371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.972695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0890412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAT ACAAAAAAGA GGCTGGAGAA AAGGAAGAGC TCCATCTTCT ATCCAAATAT
AACAAGACAC TGCTTTTTGG TGGTGGCCTG GTTTTCTCTC TTCTTGTCAT TGCTGTGGCA
ATGCTTGCGA CCCTGTTTGA GTTCAACGAC TTCATAGAAG AAAGAAAAGC GGTATTTCAG
AGCAAGAGAA CCAGAGTGCT GGTGGAGGTG GAAACAAAGC AAGTCATCAT GATGCGTGGG
ATAATTGCAT CAGAGTTGCT TTGGGGGCAG CCGCATATAT CTCATTCTGG TGTCTTTGGC
GGGGCAGATG CTGTAATAGC AGGTGTAAGC CCTGTGGTAT TGCTTGAGGA CAAGATTGAC
AAGAATGTAC ACAAGCCTTA CAGAGATATT TTGGTAGAGC TGGCATATTT GGCCAACTCC
AGCTTTCTTC AAAATGGGAG AGCAATATCT GCCTATGTCT TCAGTCCGGA CAAATCGTTC
ATAGGCGTCC TTGTTCCACA GAAATTAAAC GAGCATGAGC GAGAAAACAT GCTCTTGAAA
CTCAGGGACC AGATTTCGAC CTTGCCTGAA GACAGCCGTC CCACCATTGC GTCGGCCAAG
CTGCGCCATC CCATATGGTT GCCTCCCGGT AAAAGCATTC TGACTGGGGA GATGTCATTT
CAGATTGTTG TCTCGGCTTT CCACGAAGGC AAGCCATTTC TCACGGTAGT GAGTGACATG
CCTACTCAAT ATATTGAGAG CCTGATGCAA CAGGGCGAAG ACAAGCACTC TTTTTTTATT
ATTGATTCGC AAGGAAACAT TGCGCTGGGT GGAGAAAAAA CCGGCGATGC AATAGGTGAT
TTTCTTGATA TAGAAGCGTC GAAGCTCAGC GGCGGTCTGA TGAGTCGATA TATTCTTGGA
AAGTATGGCG CCGTCTATAG GAATGGATGC TTTTATTATT ATTCGAGGAT ATCGAATACA
AACATGGTAT TTCTCCAGGT TTTCTCCTGG AGAGATGCCG TTTTTTTGAA TGGGAAGTCT
CTTGTATATT TGCTGCTTTC ATTGATATTC ATCATTCTTA TATGGTGTTT TTTGATATAT
TTCTATGGCA GGGTATTTAT TCCGGTATAT GGAAAGGCCA AGGATGTATT CGACTCGGAG
CATCTGAGTC GAACCATCAT TGCCATGGCT CCTTATGGAC TTGGTCTTCT TGACTTCAAG
GAAAAGAAGA TGCTGCTGGA AAACAGCATG ATGTACAAGT ACAAAGAAAG CCTGGTGTTG
GATGATGAGT CCACTGGTGA GCGGTTGATT GAATATTTTC TCAGATTCTA CGGTGAGAAA
TATCTGGATG GAAAAAAGCC TGAATATTCT CCGGTGGTCA GCGAAATCGT GGTCTCTTAC
AATGGAACAA TTGCAGAGCT TTCAGTGATC ATGGTGAAGG CCAGATATCA GGGGCGGCGT
GTCCTGCTGT GTGGATTTGC CGATATCACG GCGCACAAGC AAGTGCAAAG AAATCTGGAA
GATGCCAGAA AGGCGGCAGA AGAAGCAAAC CAGGAGAAAT CTTCTTTTCT AGCCGCCATG
AGCCACGAGA TACGTACGCC ACTGAATGCA ATATTGGGCA ATCTGGAAAT ACTGGGAAGA
AGCTCCATGT CAGAAGAGCA GCAAACCAGG CTCGCCACCA TATCATCTTC ATCCCATTCT
CTTTTGACCC TGCTGAATGA TGTCCTCGAC TTCTCGAAGA TCGAGTCTGG TCAGATGAGT
GTGGAATTGA CCAGCTTTGA TCTCAAGTCC GTGATCCGGC AAGTGGCCGC CATTTACAAA
CCGCTGGCTG CTGAGTCGGG AATAGAATTT TCCTTGATTC TTGATGACTC GCTGAAGGAT
GGATATATAG GGGATGGCGA GAGAATAAAA CAAATCCTGA ACAATCTTCT CAGTAATTCC
TTGAAATTCA CCAAGGCAGG CAAGATTGAC GTGTTTGCAT CAGACAGGGC AGGTGAGCTG
AAGATCAAAG TGTCGGATAC CGGGATAGGC ATTCACCCTT CACAGCACGC TTTCATCTTT
GACGCATTCA AGCAGGCCGG CTCGGATATA GCAGCGGAAT TTGGTGGTAC GGGGCTGGGC
CTGACGCTGT GTCAGCGTAT GGCGCATCTC ATGGGCGGGG AAATCCGGTT CTTCAGCGTG
CCAGGAAAGG GCAGCATATT TGAATTGACC GTGCCTGCAT ACCACGCCCG GCCTGTTCCT
GCTTCGGTGG GGCAGGACGA TGACGATGCC ATGCTTGCAG ACGATGAAAG CGCGGGTGGT
TGCGCGAGGG TTCTCATAGT CGATGATCAC CCGGTCAACA GACTGCTGCT TCTGGATCAG
CTGAAAATCC TCGGCTTCGA GGCAGAATCT GCAGAAGGCG GGGAATCCGC ATTGCGAATG
ATGTCGCAGA ATATCTATGA CCTGGTTCTT ACGGACCTGC AAATGCCTGG CATGAGCGGT
TATGTACTTG CTCAGCGCAT CAGGCAGAAT TATCCGGGAA TTCCTGTGGG AGCAATAACG
GCACATGCAG GCAAGCAGGA AAAATTCAAA TGTGCAAAAT TTGGCATCGC AGATATTCTT
GTCAAGCCGG CCTCCTTGAA AAACATCAAG GAATTCATTG GGAAAAATAT AGGAAAGTCC
GGCAAGGGTG CCGTTGAAGC TGCGGAAGTT CAGGGCAGCA GATTGCCTTA TCGTGATGTA
TTGATTTCAG CAACCGAAAG CTCATTGGCT GCGTTGAGAA AGCATTTGCT GCAAGGTGAT
CTGATGGCTG TGCACCGTGA AATTCATGCC ATGAAAGGGT CATTTGCGGT GGCTGGGCTG
AAGGATAGAG TGGAAGATAT GGACCGATTG TCATCACTTG TCAATATGCG GCACTTCCGT
GCAGTGGATG ATGCCCTGGC TGGCCTGCTG GAGAACCTGA GAGATATCTG A
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| Protein sequence | MEIYKKEAGE KEELHLLSKY NKTLLFGGGL VFSLLVIAVA MLATLFEFND FIEERKAVFQ
SKRTRVLVEV ETKQVIMMRG IIASELLWGQ PHISHSGVFG GADAVIAGVS PVVLLEDKID
KNVHKPYRDI LVELAYLANS SFLQNGRAIS AYVFSPDKSF IGVLVPQKLN EHERENMLLK
LRDQISTLPE DSRPTIASAK LRHPIWLPPG KSILTGEMSF QIVVSAFHEG KPFLTVVSDM
PTQYIESLMQ QGEDKHSFFI IDSQGNIALG GEKTGDAIGD FLDIEASKLS GGLMSRYILG
KYGAVYRNGC FYYYSRISNT NMVFLQVFSW RDAVFLNGKS LVYLLLSLIF IILIWCFLIY
FYGRVFIPVY GKAKDVFDSE HLSRTIIAMA PYGLGLLDFK EKKMLLENSM MYKYKESLVL
DDESTGERLI EYFLRFYGEK YLDGKKPEYS PVVSEIVVSY NGTIAELSVI MVKARYQGRR
VLLCGFADIT AHKQVQRNLE DARKAAEEAN QEKSSFLAAM SHEIRTPLNA ILGNLEILGR
SSMSEEQQTR LATISSSSHS LLTLLNDVLD FSKIESGQMS VELTSFDLKS VIRQVAAIYK
PLAAESGIEF SLILDDSLKD GYIGDGERIK QILNNLLSNS LKFTKAGKID VFASDRAGEL
KIKVSDTGIG IHPSQHAFIF DAFKQAGSDI AAEFGGTGLG LTLCQRMAHL MGGEIRFFSV
PGKGSIFELT VPAYHARPVP ASVGQDDDDA MLADDESAGG CARVLIVDDH PVNRLLLLDQ
LKILGFEAES AEGGESALRM MSQNIYDLVL TDLQMPGMSG YVLAQRIRQN YPGIPVGAIT
AHAGKQEKFK CAKFGIADIL VKPASLKNIK EFIGKNIGKS GKGAVEAAEV QGSRLPYRDV
LISATESSLA ALRKHLLQGD LMAVHREIHA MKGSFAVAGL KDRVEDMDRL SSLVNMRHFR
AVDDALAGLL ENLRDI
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