Gene Daci_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3902 
Symbol 
ID5749485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4298346 
End bp4299278 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content53% 
IMG OID641299000 
Producthypothetical protein 
Protein accessionYP_001564918 
Protein GI160899336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.400318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0196844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAT CCACAGATCT CACCCGCCCG TATATCAGCT ATGAAAAGGC CTTCAACAGG 
CAGATCACCC GTGCCATGGA CAGTCAGCAG GTGGACGTGG TGGTGCTCAC GCCGCAAGAG
TTCCTAGGCG TCCTGCAAGA CAGGTCGCGC AATGACCCGC GCCTGGAGGC CAACCTGCGC
GCCATCCTGG CCCAAAGCGC CCTGGGCCGG TATTGGACGC AGACGGCCAG CCCCAATGCC
GGCAAACCCT GGACCATCCC CGCCTCCATG TTGGCCAATG ACGCGTACCT GCTCACCAGA
ACGCTGATTG CATTGCGCCT TGCCGGTGCG CGCACCTATG TCAAGGCGAC TCCCAAGGGC
ACCTATATCA TCATCACGGG CCGAGCCGGG TTTCGCGGCA ATCTGCTGCA GGGCACGCGC
TTTCTCACCA CCAATCCCCG CATGGTCCAG ATGGGCCTGG GCATGCGCGG CCTTCAGGGC
GTGGCCAGAG GGGGCTTCAT CTTGAGCTTG GTCGTGGGTA TCGGCGTGGA GACATTGGAT
TTCATCTTCA ACGACGAGAA GACCATGCAT GACCTGGTTG GAGGGATTGG AGTGGAGGCG
GTCAAGGCTG GGTTGGCGAC GATGGTCGGT ATCAGCATAG GAGGAGCGTT TGCTGCCAGC
GCAACAACTC TTGCTATTTT GCCTTTGACT TTCATGGCGT TAGCCGTGTT TGTGAGCGGA
ATAGTCTTAA ATGAAACCGA TAAATTTTTT GAAATTAAGA GAAATGTAAT TAGTGCATTA
AAAATGTTAA CAAATAGTAC ACCTTCGGGA CTATATCGCG TCAATGTTAG CATGGAAGAA
TTCAGTGAAA AACTTGAAAA AACAAAAATT GAATTCACCA ATCCATCTAA AGCATCTGAA
AATCAACTAT GCCCCATAAA TCGAAGATGC TAA
 
Protein sequence
MATSTDLTRP YISYEKAFNR QITRAMDSQQ VDVVVLTPQE FLGVLQDRSR NDPRLEANLR 
AILAQSALGR YWTQTASPNA GKPWTIPASM LANDAYLLTR TLIALRLAGA RTYVKATPKG
TYIIITGRAG FRGNLLQGTR FLTTNPRMVQ MGLGMRGLQG VARGGFILSL VVGIGVETLD
FIFNDEKTMH DLVGGIGVEA VKAGLATMVG ISIGGAFAAS ATTLAILPLT FMALAVFVSG
IVLNETDKFF EIKRNVISAL KMLTNSTPSG LYRVNVSMEE FSEKLEKTKI EFTNPSKASE
NQLCPINRRC