| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3887 |
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| Symbol | |
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| ID | 5749470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4281307 |
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| End bp | 4282257 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298985 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001564903 |
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| Protein GI | 160899321 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0600139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.283003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCC TGGCATTCAA CATCCTTGTC CAGATCATCG AACACGGAAA CCTGAGCCAG
GCGGCAAAGT TCTTGAACAT GTCGCGGGCC AACGTGAGCT ACCACCTGGC CCGGCTGGAG
AAGTCCCTTG GCGCATCGCT GCTGCGCAGA ACGCCCCAGG GCGTGGAGGC CACCGAGGTC
GGCCAGCGCA TCTACCGCCA TGCGCGCAAC ATCCTCAACG AGACCGAACT GGTGCGCGAG
CTGGCCCAAA GCAGCACGGA CGACATCTCG GGAAAGATCG GGCTGAGCGT GCCCACCGGC
TACGGCCACC TGGTCATGGC GCCGTGGCTG ATCGAGTTCA AGCGCGCCCA TCCGCAGGTG
GTGCTGGACA TCCGCCTGGA AAACTTCATA GACAACCTGC TCAAGGACAG CGTGGACATC
GCGATCCGCG TCATGTCCGA CCCGCCACCC ATGCTGGTGG CGCGCGACAT GGGGCCGGTG
CGCTACAGCC TGTGCGCATC CAGCGACTGG CTGCGCAGCC ACCGCCTGCC GGAGACCCCG
TCCGAGCTGT CGCGCACGCC GCTCATCACA TCGGGCGGAG AAAGCGGCAA GGTGCGCCTG
CAGATCGCGC GGAACGGCCA GCCGCTGGAG GAGCTGGACA TCACGCCCAC GCTGATGTCG
CGCAGCTACC CTTTCCTGTG CGACTGCATC ACCGGCGGCC TGGGCGTGGG GCTGGTGCCC
GACTACATGG TGCGCAGCCA AGTGGAAGAT GGCCGCGTCG TGCTGGCCAT GCAGGACTAT
GAGTTCAGCA TCAACCAGGG CCGCATGTTC ATGCTGTACA TGCCCAACCG CTTCCAGTCC
GGCGCCGCCC GGGCCTTGAT CGACTTTCTG AGCGACAGGA TGGGTCTTGC GCGCATCATC
CGGCCGGGTG ACTTGCCCGA CACGGCGCAG GCCTTGCGAC CGCCGGAATG A
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| Protein sequence | MDFLAFNILV QIIEHGNLSQ AAKFLNMSRA NVSYHLARLE KSLGASLLRR TPQGVEATEV
GQRIYRHARN ILNETELVRE LAQSSTDDIS GKIGLSVPTG YGHLVMAPWL IEFKRAHPQV
VLDIRLENFI DNLLKDSVDI AIRVMSDPPP MLVARDMGPV RYSLCASSDW LRSHRLPETP
SELSRTPLIT SGGESGKVRL QIARNGQPLE ELDITPTLMS RSYPFLCDCI TGGLGVGLVP
DYMVRSQVED GRVVLAMQDY EFSINQGRMF MLYMPNRFQS GAARALIDFL SDRMGLARII
RPGDLPDTAQ ALRPPE
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