Gene Daci_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3884 
Symbol 
ID5749467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4277322 
End bp4278050 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID641298982 
Producthypothetical protein 
Protein accessionYP_001564900 
Protein GI160899318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.035033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.302513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC ACTGGATTCT TGTCTCCGCA CTCCTGGCCG CCAGCGGCGC CAGCCAGGCC 
CACCAGATCT GGCTGGAACA GCCGGCCGGC GAAACCGCCG TGATCCGCTT TGGCGAGTTT
GGCGACAACC TGCGCGAGAC ATCGCCGGGC CTGCTCGACA AGTTCGGCAA GCCCGTGGCC
ACCCTGGTGT CTGCCCAGGG CGAGAAGGCG GCCGATGGCC GCAAGACCGG CACCGGCTTT
GCGCTGCCCT TCAAGGCCGG CCAGGGCGAC AGCATCGTGG CCGAGGATGC CGGCTACCCG
CTGTACACCA GCAAGAAGGG CGAGCAGGAA CTGCGCAACT GGTACCACCC GGCCGCGCGC
CTGATCACCG GCTTTGCTGC CCAGGCCTCG CGCCTCACGC TGGATGTCGT GCCCTCGGGC
AAGGCCGGCG AGTTCAAGGT CATCTACAAG GGCCAGCCGC TGCCCAAGGC CAAGGTCGTG
CTGACCGTGC AATCGGGCTG GAGCAAGGAA GCCCACGCTG ACGAGCAGGG CCTGGTGCAG
TTCGACATGC CCTGGAAGGG CACCTACGTG GCCGAAGCCA CGCACGACGA GCGCAGCGGC
GGTGAGCGCA CCGGCCCGAA CGGCGCAGAA AAATACGACG GCGTGCACTA TGTGACCTCG
GTCACCTACG TCAAGCCCGA AGGCGTGGCG CCCATCGCTG CCGGCCCTGC GGCCAAGCCC
AACAAGTAA
 
Protein sequence
MKKHWILVSA LLAASGASQA HQIWLEQPAG ETAVIRFGEF GDNLRETSPG LLDKFGKPVA 
TLVSAQGEKA ADGRKTGTGF ALPFKAGQGD SIVAEDAGYP LYTSKKGEQE LRNWYHPAAR
LITGFAAQAS RLTLDVVPSG KAGEFKVIYK GQPLPKAKVV LTVQSGWSKE AHADEQGLVQ
FDMPWKGTYV AEATHDERSG GERTGPNGAE KYDGVHYVTS VTYVKPEGVA PIAAGPAAKP
NK