Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3884 |
Symbol | |
ID | 5749467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4277322 |
End bp | 4278050 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298982 |
Product | hypothetical protein |
Protein accession | YP_001564900 |
Protein GI | 160899318 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.035033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.302513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAC ACTGGATTCT TGTCTCCGCA CTCCTGGCCG CCAGCGGCGC CAGCCAGGCC CACCAGATCT GGCTGGAACA GCCGGCCGGC GAAACCGCCG TGATCCGCTT TGGCGAGTTT GGCGACAACC TGCGCGAGAC ATCGCCGGGC CTGCTCGACA AGTTCGGCAA GCCCGTGGCC ACCCTGGTGT CTGCCCAGGG CGAGAAGGCG GCCGATGGCC GCAAGACCGG CACCGGCTTT GCGCTGCCCT TCAAGGCCGG CCAGGGCGAC AGCATCGTGG CCGAGGATGC CGGCTACCCG CTGTACACCA GCAAGAAGGG CGAGCAGGAA CTGCGCAACT GGTACCACCC GGCCGCGCGC CTGATCACCG GCTTTGCTGC CCAGGCCTCG CGCCTCACGC TGGATGTCGT GCCCTCGGGC AAGGCCGGCG AGTTCAAGGT CATCTACAAG GGCCAGCCGC TGCCCAAGGC CAAGGTCGTG CTGACCGTGC AATCGGGCTG GAGCAAGGAA GCCCACGCTG ACGAGCAGGG CCTGGTGCAG TTCGACATGC CCTGGAAGGG CACCTACGTG GCCGAAGCCA CGCACGACGA GCGCAGCGGC GGTGAGCGCA CCGGCCCGAA CGGCGCAGAA AAATACGACG GCGTGCACTA TGTGACCTCG GTCACCTACG TCAAGCCCGA AGGCGTGGCG CCCATCGCTG CCGGCCCTGC GGCCAAGCCC AACAAGTAA
|
Protein sequence | MKKHWILVSA LLAASGASQA HQIWLEQPAG ETAVIRFGEF GDNLRETSPG LLDKFGKPVA TLVSAQGEKA ADGRKTGTGF ALPFKAGQGD SIVAEDAGYP LYTSKKGEQE LRNWYHPAAR LITGFAAQAS RLTLDVVPSG KAGEFKVIYK GQPLPKAKVV LTVQSGWSKE AHADEQGLVQ FDMPWKGTYV AEATHDERSG GERTGPNGAE KYDGVHYVTS VTYVKPEGVA PIAAGPAAKP NK
|
| |