Gene Daci_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3842 
Symbol 
ID5749425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4234933 
End bp4235721 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID641298940 
Productprotein serine/threonine phosphatase 
Protein accessionYP_001564858 
Protein GI160899276 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00104123 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.167373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCT ACCTCGACGG AGCCGACCAC CGCTACAGCA TCCAGGTGGC CAGCGCCTCC 
CACAGCGGCA GGCGTTCCAG CAACGAAGAC GCCATGGGCC TGATGGACCT GGGCGCCGGC
GGCCTGTGCT GCACCCTGGC CGATGGCGCT GGCGGACACG GGCACGGCGA GCTCGCCGCC
CAGCTCACGG TCCAGGCCGT GCTGGAAGGC TTCCGGGAGA ACCCGCTGTT CGCCCCCGCC
AGTCTGGCCT CCCTGATTTC GCAGGCGGAG CACCGCGTCA GCGGCCAGCA GTCCACCTCG
GCCTCGCGCA TGCACATGAG CGCCACCGTG GTGGTGCTGT GCATCGATCC CGAGCAGGGC
CGGGCCTTGT GGGCGCACTG GGGCGACTCG CGCCTGTACT GGTTCCGCGC GGGCCGCATG
CACCTGCGCA CCGAAGACCA CAGCCTGGTG CAGCAGCTGC TGCACGCCGG CCTGTACGAA
GAGAACGACC CGCGCCGCCT GCCCAACCGC AACGTGCTGG CAGGCGCCAT TGGCGCCGAG
GGCCAGGTGC CGCCCAGCAT CCGCGCCAAC GCCGTGGCCC TGGAGGCCGG CGATGTCTTC
CTGCTGTGCT CGGACGGCCT GTGGGAAGGC ATGCACGAGT CGGAAATGGA GCAGTTGCTG
ACCGCCAGCC AGCGCCCCGA CGAATGGATA CAGCGCATGG TCGGCCGCGT CGTATCCAGC
GGCAATCCGC ACCAGGACAA CCTCAGCGCG CTGACGGTGT GGATCTGCCC GCGTGAAACC
AATGACTGA
 
Protein sequence
MIAYLDGADH RYSIQVASAS HSGRRSSNED AMGLMDLGAG GLCCTLADGA GGHGHGELAA 
QLTVQAVLEG FRENPLFAPA SLASLISQAE HRVSGQQSTS ASRMHMSATV VVLCIDPEQG
RALWAHWGDS RLYWFRAGRM HLRTEDHSLV QQLLHAGLYE ENDPRRLPNR NVLAGAIGAE
GQVPPSIRAN AVALEAGDVF LLCSDGLWEG MHESEMEQLL TASQRPDEWI QRMVGRVVSS
GNPHQDNLSA LTVWICPRET ND