| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3841 |
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| Symbol | |
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| ID | 5749424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4232891 |
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| End bp | 4234936 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298939 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001564857 |
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| Protein GI | 160899275 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00388095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.114033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAA TCGAACTCAG GGTCGTGGAC CACGATGGCG TTCCGGTCGA TCGCCACTGG
CATGCCGTAT TCGGCATGGC CGGCGGCACG ATCGGACGCA GTGGCCAGAA CAAGCTCATC
ATCTCGGACC CGGACGCTTC CGTCGCGCGC GTGCACGCCA TGGTCAGGCT GGATTCCGAG
GGAGCCTTTG TTGCGAACCT GAGCGAGCGT GATCCCATCT GGGTGGCAGA GCAGCCCGTG
CGTTCGGGCC AGGAAGTGGG CCTGCCCCTG GGCGCGCGCA TCCGTATCGG CGCCTACACC
CTGGCCGCCG TGGCGCCGGG CACGCCTTTC GAGGCACCGC CTTCGGCTGC AATGCAAAAC
GCGCAGGCCG CGCAAGCAAC GCAGGCAGCG GCCCCACCCG CCACAGCCGC CCCGCAGCCC
CAGATCGTCC CGCCTCCCGT CGCCGTCCAG CCCCCGCTGC AGGAAGCAAC GCCGCTGGCA
GACATATTGC CTGCCGCCGC CCCCGGCATC GCCGATCCCT GGGAAGGCCT GACGGCACTG
AGCCTGGATG CCATCCAGAC CCCTGCCGTG CCTTCGATCG AGAGCGCCAT CCCGCCCGAG
CAGGCTGCAC TGGCCATGCC GCAGCCCGCC AAGCCGCAGC ATCGCCCCCT GCTGATCCCC
AATGATTTCG ACCCCTTTGC TCCGCCGCCC CAGCAAGCTC GCCAGCAGGA GGAAGGCTGG
GCCGGCCTGC CATCGCAAGG CACGGGCGAG CTGATACAGC AGCGCCATGA CGGCATGGTA
CACACCCTGC CGCTCAAGGG CCTGAGCACC GAGGCCTTGC ATGATGCCTC CCATACCGGC
CTGCCTTCGT GCTTCGAGCA ATCCCAAAAG CTCGACCCGC TTGCGCTGTT CGACCAGGGT
GGACTGCCCC CCGATGCGCA GCCGCTGCAG CAGGCCTCGG GCCGGGGCTC CGAACTGGGC
CAGGCCTTCA ATCTGCCGCG CATGCAGTCG CATGCACAGC CCGCAGAGCC GGTGCCACCG
CAGGAGGCGG CAGCACCGGC CCAGCCCGCA CTCCCGCCCG TGATCGATAC CGTGATTCCT
GCAGTGCAGG AGCAGCTTCC TGCACAGGTA GAGGCACGGG CACAGGCACA GGACATCCCG
GTTGCCGCGC CTGCCCCGGC GCCCGTGCCC CAGATCCCCG CCGAGCCGGC CGCGCTGGAC
GGTCTGCTGC CCACCAATGG ACTGGATCTG GACCTCTTCA AGTCCGGTCT TGCCCATGCT
GCGCCCGTCG CCAGGGCTAC CGTTGCCGCT GCCTCGGCTC CCCCCCTTGA CGCAGGCATC
AACGTCAATA TCCCCGCGAC CTCCAGCATC CTCGGCCAGG GCGACGCCGC CATCCCCATC
GGCGCCCTGC CCTCCACAGC CGCGCCTGTC GATATTCCCG TGCAGCCCCA GCCGGCCGCC
AACGCCGATC TGCAGGCACT GGCCGCCGCC TTCATGGAGG GCGCAGGCCT GAACCCGGCC
AAGACCCATT TCGAGGTCAC ACCGGAATTC ATGCGCACTT TCGGCGAAGC CCTGCGCATT
GCCGTGCAGG GAACCATCGA CCTGCTGGCC GCGCGCTCCG AGATCAAGCG CGAGTTCCGC
GCCGGCGTGA CCATCATTGC CACGGGCGCC AACAACCCGC TCAAGTTCCT GCCCAATTCC
GAGGGCGTGC TCATGCAGAT GGTCCACCAG ACCTTCCCGG GCTTCATGAA GCCGCTGCCT
GCCATGCAGG ACGCCTTCCA GGACCTGCAT GTGCACCAGC TGGCCCTGAT GGCCGGCATC
CGCGCCGCCT ATGCCGAGGC CCTGACCCGG TTCGATCCGA CCGAGCTGGA GCGCCGAACA
GAAACCAACC CCGGCCTGCT GGACAAGCTG CTGACCAATG GCCGCAAGGC CGCCCTGTGG
GACGACTACA AGCACAACTT CGACGTGCTG CGCCGCCATG CCGAGGACGA CCTGATGGCC
TTTTCTGGCC GCACCTTCGT CGAGGCCTAC GAAAACGCCG AGCAGTCCGT GAAAGGCCAG
CCGTGA
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| Protein sequence | MDKIELRVVD HDGVPVDRHW HAVFGMAGGT IGRSGQNKLI ISDPDASVAR VHAMVRLDSE
GAFVANLSER DPIWVAEQPV RSGQEVGLPL GARIRIGAYT LAAVAPGTPF EAPPSAAMQN
AQAAQATQAA APPATAAPQP QIVPPPVAVQ PPLQEATPLA DILPAAAPGI ADPWEGLTAL
SLDAIQTPAV PSIESAIPPE QAALAMPQPA KPQHRPLLIP NDFDPFAPPP QQARQQEEGW
AGLPSQGTGE LIQQRHDGMV HTLPLKGLST EALHDASHTG LPSCFEQSQK LDPLALFDQG
GLPPDAQPLQ QASGRGSELG QAFNLPRMQS HAQPAEPVPP QEAAAPAQPA LPPVIDTVIP
AVQEQLPAQV EARAQAQDIP VAAPAPAPVP QIPAEPAALD GLLPTNGLDL DLFKSGLAHA
APVARATVAA ASAPPLDAGI NVNIPATSSI LGQGDAAIPI GALPSTAAPV DIPVQPQPAA
NADLQALAAA FMEGAGLNPA KTHFEVTPEF MRTFGEALRI AVQGTIDLLA ARSEIKREFR
AGVTIIATGA NNPLKFLPNS EGVLMQMVHQ TFPGFMKPLP AMQDAFQDLH VHQLALMAGI
RAAYAEALTR FDPTELERRT ETNPGLLDKL LTNGRKAALW DDYKHNFDVL RRHAEDDLMA
FSGRTFVEAY ENAEQSVKGQ P
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