Gene Daci_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3832 
Symbol 
ID5749415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4223002 
End bp4223391 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID641298930 
Producthypothetical protein 
Protein accessionYP_001564848 
Protein GI160899266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000375961 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0175839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TTGCCCTCAC CGTCGCATCG CTGGCCGCCG CCGCTTCGCT GGTGTCCACC 
AGCGCCAATG CCGCAGCGTC GATCTTCCTC AACGACACCA TCGCCGCACG CATTCCCGCC
AGGGACCTGC CCGACGCAAA GGCCGCCGTG GCCAAGGTGC TCAACGAGGC CGCCGACGGC
TCCGTGACCG AATGGACCAG CGGCCCGAAC CGTACCAACC AGCGCGTGAC GATGGCCTTG
CAGCCGCAGC AGACCGTGCA GACCGGCTCG GCCGGAAGCT GCCGCCTGCT GTCGGCCGAC
GTGCGCCTGA AAAAGACCTC GGAAAACTGG CGCTTCTGGT TCTGCAAGCA GTCCGATGGT
TCGTGGAAGG CCAGCGGCAG CCAGCCCTGA
 
Protein sequence
MKTFALTVAS LAAAASLVST SANAAASIFL NDTIAARIPA RDLPDAKAAV AKVLNEAADG 
SVTEWTSGPN RTNQRVTMAL QPQQTVQTGS AGSCRLLSAD VRLKKTSENW RFWFCKQSDG
SWKASGSQP