Gene Daci_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3829 
Symbol 
ID5749412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4217784 
End bp4218398 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID641298927 
ProductCheB methylesterase 
Protein accessionYP_001564845 
Protein GI160899263 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.153507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0823078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA CCACGAACAC ACCCGCCTCC GACGCCGCCA CAGCCTACGA GGCCATCGTG 
ATCGGCGGCT CGGCCGGCGC GCTTGATGCG CTGTCCGCGG TGCTGCCCAC GCTGCCCGCC
AGCCTGCGCG CTTCGGTGCT GGTGGTACTG CACCTGCCGC GCGACCGGCG CAGCCTGCTG
GGCCAGCTTT TCGGGCCGCG CTGCGCCCTG CCGGTGCGCG AGGTGCAGGA CCAGCAATGG
CTGGAGCCGG GCTGCCTGTA CTTTGCGCCG GCCGACTACC ACCTGCTGGT GGACAGCGGT
CCCAGGCTGG CGCTGTCGCT GGATGCGCCC TGGCATTTTT CGCGGCCCTC GATCGATGTG
CTGTTCGAGT CGGCTGCCGA CTGCTATGGC GAGCGCCTGC TGGCCGTGCT TCTGTCCGGC
GCCAACGAGG ATGGCGCCCA GGGCATGGCC AGCGTGCACG CGGCCGGCGG CCTGGCCGTG
GTGCAGTCGC CAGACAGTGC CGCAATGCAG ACCATGCCGC GGGCGGCCCT GGCCCGCGTG
CCACAGGCCC AGGTGCTGGC GCCGCAGGGC ATTGCCGCGC TCATCGCATC GCTGCACGGC
CAGGGGAGGC TTTGA
 
Protein sequence
MPATTNTPAS DAATAYEAIV IGGSAGALDA LSAVLPTLPA SLRASVLVVL HLPRDRRSLL 
GQLFGPRCAL PVREVQDQQW LEPGCLYFAP ADYHLLVDSG PRLALSLDAP WHFSRPSIDV
LFESAADCYG ERLLAVLLSG ANEDGAQGMA SVHAAGGLAV VQSPDSAAMQ TMPRAALARV
PQAQVLAPQG IAALIASLHG QGRL