Gene Daci_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3820 
Symbol 
ID5749403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4206776 
End bp4208851 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content65% 
IMG OID641298918 
Productband 7 protein 
Protein accessionYP_001564836 
Protein GI160899254 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.22984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.142828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA GCAACATGGA GTGGTACATC GTCGCCGGGG TGGTGATCGG TTCCGTCTTC 
GTCGTCATCC TCGGGCTGTT CGCCCTGGTC AAGGCCTTCT ACATCAAGGT TCCGCAGGGC
ACGGCGCTGA TCATCAACGA CACCACGTCG CAGCCCAAGG TCAAGTTCAC GGGCGGCCTG
GTGCTGCCGG TGATCCACAA GAAGGAATTC ATGCAGATCT CGCTGCTGAC GCTGGAGATC
GACCGGCGCG GCAAGGAAGG CCTGATCTGC CGCGACAACA TGCGCGCCGA CATCACCGTG
GCCTTCTACC TGCGCGTCAA TGAAACGGCG GAAGACGTGC TCAAGGTGGC CAAGGCCATC
GGCGTGGACC GGGCCTCGGA CAAGACGGCC GTCAACGAGC TGTTCAACGC CAAGTTCTCC
GAGGCGCTCA AGACCGTGGG CAAGCAGATC GAGTTCGTCA AGCTGTTCGA GAACCGCCAG
GATTTCCGTG ACCAGATCAT CCATGTCATC GGCAACGACC TCAACGGCTA TGTGCTGGAG
GACGTGGCCA TCGACTACCT GGAGCAGACG CCCAAGTCCT CGCTGGACCC CAACAACATC
CTGGACGCCG AGGGCATCCG CAAGATCACC GAGCTGACGG CCAACCAGAA CATCGTCACC
AACGAACTGG AGCGCAACTC GGACCTGGCC ATCACCAAGA AGAACGTGGA GACCAAGGAA
GCCATGCTGG CGCTGGAGCG CCAGCAGGCC GATGCCGAGG CGCGCCAAAA GCGCGAGATC
GCCACCATCC AGGCGCGCGA GCAGGCCGAA ACCCAGAAGG TGCAGGAAGA AGAGCGCCTG
AAGGCCGAGC AGGCCCGCAT CCAGACCCAG GAGCAACTGG ACATCCGCGA GGAAAACCGC
CAGCGCGAAG TGGCCGTGGC CCAGCAAAAC CGTGAGCGTG CCGTGGTGAT CGAGGTCGAG
AAGGTCACGC GCGCCAAGGA GCTGGAGATC GTGGCCCGCC AGCGCGAGGT GGAGCTGCAG
CGCATCGAGA AGGAAAAGGC CATCGAGGTC GAGAAGGCCA ACATCGCCAA CGTGGTGCGC
GAGCGCGTGG TGGTGGAAAA GTCCGTGGCC CAGGAAGAGG AACGCATCAA GGAAGTGCGC
GTCGTCTCCG AGGCCGAGCG CATGAAGCAG GTCACCGTGC TGACCGCCCA GGCCCAGGCC
GAGGAAGACA TGGTGCGCCA GGTCAAGAAG GCCGAGGCCG AAGAGGCTTC CTCGCGCCAC
AAGGCCGTGG AAGTCACGAC CATGGCCCAG GCCGAGCTGG AAGCGGCCAG CAAGACCGCC
GAAGCCAAGA AGAAGCTGGC CGAGGCCATC GAGGTCGAGC GCGCCGCGCC CGGCCTGGCC
GATGCCAAGG TGCGCGAAGT CACCGCCGCC GCCCTGGAAA AGGAAGGCCT GGCCCAGGCC
CGCGTGATTG CCGAGAAGCT GATGGCCGAA GCCAAGGGCC ATCAGGAAAA GGGCCTGGCC
GAGGCGCGCG TCATCGAGGC CACGGCCGAC GCCAACGAAA AGCAGGGCCT GGCCGATGCC
AAGGTGCTGG AAGAACGCCT GCTGGCCCAG GCACGCGGCG AGGCCCAGGT GGGCGCCACC
AAGGCCACGG TCACGCGCGA CGTGGGCATG TCCGAGGCCG ATGTGCTGCG CGACAAGCTC
TTCGCCGAGG CCAAGGGCCT GACCGAGAAG TTCACCGCGC TGGCCTCGCT GTCCGACCAG
GCGCGCTCGC ATGAGGAGTT CCGCATGCAG CTGGAAAAGA ACTTCGAGCA GGCGCTGGCC
GCCATCGAGG CCAACAAGAG CGTGGCCAAG GACCAGTCCG AGGTGCTGTC GGCCGCACTC
AGCAAGGCCA ACATCGACAT CGTGGGCGGC GAGGGCGCCT TCTTCGACAA CTTCGCCAAG
GCGCTGTCCG TGGGCAAGGC CGTGGAAGGC GTGGCGGGCA AGAGCCCCAT CGTGCAGGAC
CTGATCAGCA AGTTCCTCAG CGGCAAGGGC GGCGCATCGC TGCTGAACGC GCTGGGCGAC
GGCAAGGGCC TGCCGCCCAC GCAGAGGGTC GACTGA
 
Protein sequence
MNMSNMEWYI VAGVVIGSVF VVILGLFALV KAFYIKVPQG TALIINDTTS QPKVKFTGGL 
VLPVIHKKEF MQISLLTLEI DRRGKEGLIC RDNMRADITV AFYLRVNETA EDVLKVAKAI
GVDRASDKTA VNELFNAKFS EALKTVGKQI EFVKLFENRQ DFRDQIIHVI GNDLNGYVLE
DVAIDYLEQT PKSSLDPNNI LDAEGIRKIT ELTANQNIVT NELERNSDLA ITKKNVETKE
AMLALERQQA DAEARQKREI ATIQAREQAE TQKVQEEERL KAEQARIQTQ EQLDIREENR
QREVAVAQQN RERAVVIEVE KVTRAKELEI VARQREVELQ RIEKEKAIEV EKANIANVVR
ERVVVEKSVA QEEERIKEVR VVSEAERMKQ VTVLTAQAQA EEDMVRQVKK AEAEEASSRH
KAVEVTTMAQ AELEAASKTA EAKKKLAEAI EVERAAPGLA DAKVREVTAA ALEKEGLAQA
RVIAEKLMAE AKGHQEKGLA EARVIEATAD ANEKQGLADA KVLEERLLAQ ARGEAQVGAT
KATVTRDVGM SEADVLRDKL FAEAKGLTEK FTALASLSDQ ARSHEEFRMQ LEKNFEQALA
AIEANKSVAK DQSEVLSAAL SKANIDIVGG EGAFFDNFAK ALSVGKAVEG VAGKSPIVQD
LISKFLSGKG GASLLNALGD GKGLPPTQRV D