Gene Daci_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3804 
Symbol 
ID5749387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4186540 
End bp4187589 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID641298903 
Producthypothetical protein 
Protein accessionYP_001564821 
Protein GI160899239 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0115718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.430416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATC CCTGGTTGGC TGCGTCCCGT CAGGATGCCG CGTGCAAAAC ACGCCGAGCC 
CTGTTGACGG CCATTCCTGT TCTGGCCACA TCGCCAAGCG CGTTTACGCA AGTTCTGGAC
CCGGGAGTCA ACAAAAATGC CGTGTGCATC GCCCCGGCAA AGCTGGGCGG CGGTTTTGAC
CTGACATGCC GATTGGCAGC CAAGGCGCTC GATGGCGCGC GCAGCGGCGA TGCGAAAACA
CTGATTCAGT ATCTGCCGGG AGGAATTGGT GCGCTGGCCT ATGACAAGGC CGCGACGCAA
CAGCTCGGTG ATGAACGCAC GCTGATCGCT TTTTCCAGCG GATCGCTGCT CAATATTGCC
CAAGGAAGAT TCGGGCCTCA CAGCATTGCC TCGGTGAACT GGCTGGGGGT CCTGGCCGCA
GACTATGGAG TGGTTGCGGT AAGGGCCGAT TCACCTTATC GCTCGCTTGA CGACCTGTTG
CGAGCGATCC GGGCCAATCC AGCGGCCATT CCTTTCGGCG CGGGAGGCAC GGTGGGCAGC
CAGGACTGGA TCAAGGCGGC CCGCCTGGTC CGGGCGGCCG GACGTGATCC ACGCGAGATG
AGATTCGTGG CATTCGAGGG AGGCGGAGAG GCGCTGCGCG CCCTGGCCGG AGGGCATGTG
GTCGCATTTC CTGGCGATGC GGCCGAAGCC CAGCATGCCA TTTCCGCCGG GGAAAGGATC
AGGATACTTG CCATCCTGGC ATCGGACCGC GTACCCGGAA AACTCGCGCA CATACCGACC
GCAATGGAGC AAGGCGTCGA TGTGACCTGG ATGACGGTCA GGGGGCTCTA TATGGCGGCA
GGCACGCCTC CATCGGCAAT ACGCTACTGG TCCGACACCT TGCAAAAGGC GATGGGCCTT
CCTGGCTACA TGGCACTTCT GGAGAACTTC GACCTGTACC CCTACTCCCT GGTCGGCAGG
CCGCTGCAGG AGTACCTGAA GCAGAAAATC CAGGAGTACC GGGAAGATGC CGAAAAAATG
GGAGTGAGGA TCTGGCGAAG CCGTCAGTGA
 
Protein sequence
MQNPWLAASR QDAACKTRRA LLTAIPVLAT SPSAFTQVLD PGVNKNAVCI APAKLGGGFD 
LTCRLAAKAL DGARSGDAKT LIQYLPGGIG ALAYDKAATQ QLGDERTLIA FSSGSLLNIA
QGRFGPHSIA SVNWLGVLAA DYGVVAVRAD SPYRSLDDLL RAIRANPAAI PFGAGGTVGS
QDWIKAARLV RAAGRDPREM RFVAFEGGGE ALRALAGGHV VAFPGDAAEA QHAISAGERI
RILAILASDR VPGKLAHIPT AMEQGVDVTW MTVRGLYMAA GTPPSAIRYW SDTLQKAMGL
PGYMALLENF DLYPYSLVGR PLQEYLKQKI QEYREDAEKM GVRIWRSRQ