| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3778 |
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| Symbol | |
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| ID | 5749361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4153814 |
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| End bp | 4155883 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298877 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001564795 |
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| Protein GI | 160899213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.61426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCC GCCGTCGTCG CCACGGCGGT TTTCATTGCC ACGGCCCGTG CTTCCACCCG
CTTTCCACCA CTTTCCCCCG ATTCGCTCCG ATGTCCCTGC GCTCCCTGGA ATTTCCCACC
GATCACGGCC AACCGCTGCT GCTGTCGCGC GAGCAGCAGG CCATCCTGGC GCATGAGGGA
CGTTCGGCCA TCGTGGCGGC GCTGGCAGGC GTGGGCAAGA CGACCACGCT GGCCTGCAAG
GTGGTTCAGG CCTGCCGCAG CGGCCAGGCC CAGCGCATCC TGGTGCTGGC CTATTCGCGC
TCCGGCGTGG CGGCCTTTCA CCACCGGCTC AAGCAACTGG TGCGCGAAGT GCCGCCCCAG
GTACAGATCA CCACGGTGGA GCGCTGGGCG GCCCAGCAGA TCCGCCGCCG CGACCCTGCG
GCCCGCTTTC TGGCCGACCG CGTGGCACTG CAGGCCCGTG TGCGCGAGGC ACATGCCGCG
CTGTGCGAGC GGCTGGCCTG GCAGCCCGAC CCTTTGTTCG AGCAGCCCGG CGATCTGGAT
CTGGACGCCT TCTGGGACTT CAACCTCAGC GCCAAGAAGT CGTTGATGCC CCAGCGCCTG
GCCGAGGAAG GCATGGGACT GGCCAGTTTC TGCGAGGAGT ATTTGCTCGA CTACCGCATG
GCCGGCCTGT TCTTCGAGTA CGAGCGCCGC CGCATCGACC ACTGCGGCGA CCCGCTGTAC
TACGCCGAAG GCGACTGCAG CCATGCACTG GCCAGCGACG CCCTGCAGGG CCAGGCGCTG
GATCTGCCGC GCTACGACCT GGTGGTGTTC GATGAGATGC ATGACCTGGA CCCGGCCTCG
CTGCAACTGC TGCGCGCCCT GGTCGGAACC AGCGGCTGCG CCTTCCTGGG CGCAGGCGAT
TTCAACCAGC ACATCGAGGC ACAGGCCTGG TCCGTGTTCC GCGACAAGCT CCACCAGCTC
GATGACTTCC TGCCCCAGGC CACGGCCACG CTGGCGCTGA CCCAGTCGCG GCGCTTTGGC
CCGCAGATCG CCAAGGCGGT CAATGCGCTG TTCAACGTTG GCCTGACTGC GGCGCCCACG
CGCTTCAGCA CCGTGCAGCA ACTGCAGCAC ACCGATGACA GCCAGTGCAT TGACCAGCTG
CTGCAGATCC AGGCCGGTCT GGCACGCGGC ACGCCAACGG CGGCGCCGGG TGAGCTCCCG
TCGCCCGGCG CGCGCAATCC CTCGCTGACC GTGATCCTGC GCCATGAGCA AGATGCCTGC
GCGCTGGAAT GGGCCATCCA CCGCGCCGGC AAGTCCGCCA GCTTCTACGG CTTCAAGCGT
TTTTACCTGC AGCGCGAGAT TGCCCTGCTG CTGGGCCTTT GCTATGCACA TGGCATGCAG
GCGCTGTCAT GGAAGGCCGA GGTCAGCGTG CTGGGCAGCG AGATCCTGGC GGCCTTTGTG
GAAGGTGCGC TTTTCTACGG CAAGGGCAGC GTGGATGGTG CCGACATGGC CGATCCGTCA
AGCCGCCATA CGCTGGCCCA GCGCATGGCG GGCGAGATGC TGCACAACCC GCAGATCATC
TGGCGATTCC TGGGAAACCA GTCCAGCCTG CAGGGCGGGC AACGCAACTT CCAGGCCTTT
GGCAGCTTCT TGCAACTGCC CCTGGCGCTT CAGTCAGACG CACGCAGCCT GCTGGAGCAG
GCCGATGTCT GGGGCCTTTT TGCGGGCGTG GCCCTGTCGC AGGCCCAGAC GGCGGCCTTG
CGTCAGCGCG TGAAGGCTTT CATGGATTCG GTGGCGGGCA TGGCCGTGCC CGACATGCTG
GTCCAGGTGG CCGCCATGGC CACGCGCTTC GAACGAACCG TGCGGGCCGA GCGCGGCTTC
GACTTTCATC TGAGCACCAT CGAGGAAGCC AAGGGCAAGG AATACGAGCA TGTCGCCCTG
CCCTTCATGG AGCCTGGCCG CTTTCCGGCC TCGGCCCCGC ACGCGCTGGC CTTTCTGGAG
CGCAACCGCC TGTACGTGGC CATGACGCGC GCCCGAAAAA GGCTGTGGCT GCTGGAGCAT
GCCGAGCGGC GCGTCCAGCC TTTCGCCTGA
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| Protein sequence | MGARRRRHGG FHCHGPCFHP LSTTFPRFAP MSLRSLEFPT DHGQPLLLSR EQQAILAHEG
RSAIVAALAG VGKTTTLACK VVQACRSGQA QRILVLAYSR SGVAAFHHRL KQLVREVPPQ
VQITTVERWA AQQIRRRDPA ARFLADRVAL QARVREAHAA LCERLAWQPD PLFEQPGDLD
LDAFWDFNLS AKKSLMPQRL AEEGMGLASF CEEYLLDYRM AGLFFEYERR RIDHCGDPLY
YAEGDCSHAL ASDALQGQAL DLPRYDLVVF DEMHDLDPAS LQLLRALVGT SGCAFLGAGD
FNQHIEAQAW SVFRDKLHQL DDFLPQATAT LALTQSRRFG PQIAKAVNAL FNVGLTAAPT
RFSTVQQLQH TDDSQCIDQL LQIQAGLARG TPTAAPGELP SPGARNPSLT VILRHEQDAC
ALEWAIHRAG KSASFYGFKR FYLQREIALL LGLCYAHGMQ ALSWKAEVSV LGSEILAAFV
EGALFYGKGS VDGADMADPS SRHTLAQRMA GEMLHNPQII WRFLGNQSSL QGGQRNFQAF
GSFLQLPLAL QSDARSLLEQ ADVWGLFAGV ALSQAQTAAL RQRVKAFMDS VAGMAVPDML
VQVAAMATRF ERTVRAERGF DFHLSTIEEA KGKEYEHVAL PFMEPGRFPA SAPHALAFLE
RNRLYVAMTR ARKRLWLLEH AERRVQPFA
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