Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3724 |
Symbol | |
ID | 5749307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4092587 |
End bp | 4093444 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641298823 |
Product | Rhs family protein-like protein |
Protein accession | YP_001564741 |
Protein GI | 160899159 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0108015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00111387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCATTG CGGCAGAGAT CAACGGGCGC TTGTACGCCA TCCACACGGA CCACCTGAAC ACTCCCAGGC GCCTGACCAA CCAGCAGGGG CAGGTGGCCT GGCAATGGCT GATCTCGGGG TTTGGGGAAG TGCGTCCCAC CACGGGCGAC CGTGGCTACG GCCAGACGGT CAGCGGCCCC AGCTATGCGC AGGCGGTGAA GTTCGATCTG CGGTATCCGG GGCAGGTGTT TGATGAAGAG ACGGGGCTGT CGTACAACCT GCACCGGTAC TACGATGCGG CGACGGGGAG ATACATCCAG GCGGACCCGA TCGGGTTGGA GGGTGGGTGG AATCGGTTTG GGTATGTGGG GGGCAACCCA TTGATTTATG GTGATCCACA AGGATTGTTC AAGGTAATGT GGAAGGGAGA CAGCTTTGCA ACCCCTCCAC CTCCGTGGGT GAAGCAGTTG CGTGAATATG GAAGAAAACT GGAAGATAAG ATAGATTCAC TTTGCGCTTC TGATAGTTCT TATTTGAAGT CATATTTTGA TAAATGGACG GTTGGTACTG ATGGTCGGCG TGGAAGTCCT ACAACGGATG TAGATAATTT TCATACAAAT TTCACATCTG ACTATTTTGG GCTAACAAGT AACTTTATAA ATCCGTTCGA GAATAGTAGA GAGGATCCTT ATGCGGTATT TTTACATGAA TTCCGTCATT TGATGAAGGG GAATCGCATA CTTAGTCCAG GCGGATCAGA GTATTTGAAG TATAGATTAA ATGGAACAAC CGGAGGTTTG GCTGTTGAAC TTGATGCCGA CTCATACGCT CTAGAGCTTT TTAAGGGGAA ATGCACATGC GGAAGTTTGC GGCGTTAA
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Protein sequence | MPIAAEINGR LYAIHTDHLN TPRRLTNQQG QVAWQWLISG FGEVRPTTGD RGYGQTVSGP SYAQAVKFDL RYPGQVFDEE TGLSYNLHRY YDAATGRYIQ ADPIGLEGGW NRFGYVGGNP LIYGDPQGLF KVMWKGDSFA TPPPPWVKQL REYGRKLEDK IDSLCASDSS YLKSYFDKWT VGTDGRRGSP TTDVDNFHTN FTSDYFGLTS NFINPFENSR EDPYAVFLHE FRHLMKGNRI LSPGGSEYLK YRLNGTTGGL AVELDADSYA LELFKGKCTC GSLRR
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