| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3712 |
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| Symbol | |
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| ID | 5749295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4078870 |
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| End bp | 4080150 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298811 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001564729 |
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| Protein GI | 160899147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.611147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0114471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATT TATCGCTCCC CAAAATCAAT TCACTGGATC TTCAACAGGC AGACAGCGAG
GCCTGGGATG CCATCGCGGC CGAGCGGATT CGCCAGTCGC GCTCGATTGA ATTGATTGCC
TCTGAAAACT TCGTGAGCCG CGCGGTGATG GAGGCGCAGG GCTCGGTGCT GACCAACAAA
TACGCCGAGG GCTATCCGGG CGTGCGCTAC TACGGCGGCT GCGCCAATGC CGATGCCGTG
GAGAACCTGG CCATTGCGCG TGCCAAGGCG CTGTTCGGCT GCGCGCACGC CAACGTGCAG
CCGCACTCGG GCAGCCAAGC CAACCAGGGC GTGTACCTGG CTTTCCTGGA GCCCGGCGAC
AAGATCATGG GGCTGGACCT GCGCTCGGGC GGGCACCTGA CGCACGGCTC CAGCGTGAGC
GTGTCGGGCA AATGGTTCCA GTCCATCAGC TACGAGGTGG ACGCCCGCTC CCAACTCATC
GACATGGACC AGGTGCGGCG CATTGCGCTG AAGGAGCGGC CCAGGCTCAT CATTGCCGGT
GGCTCGGCCT ATTCACGGCA GATGGACTGG GCCGAGTTCC GGCGCATTGC CGACCGGGTG
GGCGCCATCT TCATGGCCGA CATCGCGCAC GTGGCGGGGC TGGTGGCCGC GGGCGTGTTC
CCCTCGCCCG TGGAGCACGC CCACGTGACC ACGACCACCA CGCACAAGAC GCTGCGCGGG
CCGCGCGGCG GCATGATCCT CTCGGCCGAC GCCGAGATCG CCAGGCGCAT AGACGCCGCC
GTGTTTCCTG GCCTGCAGTC CGGGCCGCTG ATGCATGTGG TGGCGGCCAA GGCGGTGGCG
CTGGGCGAGG CGCTCAAGCC CGCCTTTCGC ACCTATGCGC GGGCCGTGGT GGACAACGCC
CGCGTGCTGT GCGACCGGCT GTCGCAGGGC GGACTGTCCG TGGTGTCCGC AGGCACGGAC
TGCCATCTGG GCGTGATCGA CCTGCGCCCC TGGGAGCTGA CGGGCAAGGC CGCCGAAACG
GCGCTGGAGC AGATCGGCAT CACGGTCAAC AAGAACGCCG TGCCCGGCGA TGGCGCGCGG
CCGCTGGTGA CCTCGGGCAT CCGCGTGGGC AGCGCGGCCT GCACCACGCG CGGCATGGGC
GCCGACGAGT TCCGCGAGAT CGGCGACATG ATTCTTGCCA CGCTGGGCGG CATACGCAGC
GGCACCATGA ACGCGCGCAC GCTCAAGTCC ATCCACGAAG GCGTGTCCGA CCTGACCGGG
CGCTTTCCCC TGCCCTATTG A
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| Protein sequence | MDDLSLPKIN SLDLQQADSE AWDAIAAERI RQSRSIELIA SENFVSRAVM EAQGSVLTNK
YAEGYPGVRY YGGCANADAV ENLAIARAKA LFGCAHANVQ PHSGSQANQG VYLAFLEPGD
KIMGLDLRSG GHLTHGSSVS VSGKWFQSIS YEVDARSQLI DMDQVRRIAL KERPRLIIAG
GSAYSRQMDW AEFRRIADRV GAIFMADIAH VAGLVAAGVF PSPVEHAHVT TTTTHKTLRG
PRGGMILSAD AEIARRIDAA VFPGLQSGPL MHVVAAKAVA LGEALKPAFR TYARAVVDNA
RVLCDRLSQG GLSVVSAGTD CHLGVIDLRP WELTGKAAET ALEQIGITVN KNAVPGDGAR
PLVTSGIRVG SAACTTRGMG ADEFREIGDM ILATLGGIRS GTMNARTLKS IHEGVSDLTG
RFPLPY
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