| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3709 |
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| Symbol | |
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| ID | 5749292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4075021 |
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| End bp | 4075872 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298808 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001564726 |
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| Protein GI | 160899144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.948517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0157517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCGA CACAAGACAC CACCGGCGGC ACCGCCCAAG CCGCCGACAC CCTGACCCGC
CACGACCAGC ACGGCCGCTA CCCCCAGGCC GAGACGGTGG ACGATTTCCG GCACAACCTG
GCCACCGTGC AGGCGCGCAT GGCCGCTGCC TGCCGCCGCG CGGGGCGCGA CCCGGCCAGC
GTGCGCCTGC TGCCCGTGAG CAAGACCAAG CCCGAGTCCA GCCTGCGCCT GGCCCACGCG
GCGGGCTGCC GCATGCTGGG CGAGAACAAG GTGCAGGAAG CCTTCGGCAA GTGGGAGGCC
ATGCAGGACC TGGCCGATCT GCAGTGGTCC GTCATCGGCC ACCTGCAGAC CAACAAGGCC
AGGCTGGTGG CGCGCTTTGC CAGCGAGTTC CAGGCGCTGG ACAACCTGCG CGTGGCCGAG
GCGCTGGACC GCCGCCTGCA GGCCGAAGGC CGGGCGCTGG ACGTGTTCGT GCAGGTCAAC
ACCTCGGGCG AGGCCAGCAA GTACGGCCTG CCGCCCGACG AGGTGCAGGG ATTTGTCCAG
GCCCTGCCCG CCTTCAGTGC GCTGCGCGTG CGCGGCCTGA TGACGCTGGC CCTGTTCTCC
AGCGAGGCCG AGCGCGTGCG CCAGTGCTTC GTGCTGCTGC GCCGCCTGCG CGACCAGCTG
CGCCAGAGCG CGCCGGCGGG TATTTCGCTG GACGAGCTGT CCATGGGCAT GTCCGGCGAC
TTCGAGATCG CCATCGAGGA AGGCGCCACC GTGGTGCGCG TGGGCCAGGC CATCTTCGGC
GCCCGCGCCC AGCCGGACAG CTTTTACTGG CCCGCAGGCG GCCCCGATCC CGCGGCCCTG
GCACTGCCCT GA
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| Protein sequence | MFATQDTTGG TAQAADTLTR HDQHGRYPQA ETVDDFRHNL ATVQARMAAA CRRAGRDPAS
VRLLPVSKTK PESSLRLAHA AGCRMLGENK VQEAFGKWEA MQDLADLQWS VIGHLQTNKA
RLVARFASEF QALDNLRVAE ALDRRLQAEG RALDVFVQVN TSGEASKYGL PPDEVQGFVQ
ALPAFSALRV RGLMTLALFS SEAERVRQCF VLLRRLRDQL RQSAPAGISL DELSMGMSGD
FEIAIEEGAT VVRVGQAIFG ARAQPDSFYW PAGGPDPAAL ALP
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