Gene Daci_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3704 
Symbol 
ID5749287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4069806 
End bp4070342 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID641298803 
ProductMarR family transcriptional regulator 
Protein accessionYP_001564721 
Protein GI160899139 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0457412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0618466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACAT CTGCGCTTGC CCGCAGGGAC CCGGAAAAGA GCGCAATGGC CATGGACTAC 
CAACCCGCAG AACTAGAAAA CTACCCCGGC TACCACATCC GCCGCCTGCA GCAGATCGCG
GTAGCCGTCT TCATGGAGGA GACCCAGGAA TTCGGCGTGA CCCCCGTGCA GTACGCGGCG
CTGTCTGCCG TGCTGCGCCA ACCCGGCGTG GACCAGCGCA CGCTGGCGCG GATGATCGGC
TTCGATACCT CGACCATTGG CAGCGTCATC GACCGGCTGG AGGCGCGCGG CCTCATGGTG
CGAAACACCA GCCCGGCCGA CCGGCGCGTG CGCCTGCTCT CGGTCACCGC GGAAGGCGCT
GCGCTGCTGG CCGCTGCCGA GCCCTCGGTG CTGCGGGCCC AGCAGCGCAT GCTGGAGCCG
CTGCCGCAGG AGCAGCGGGG CCTGTTCATG GACATGATGG CCGTCCTGGT GCGGCAAAAC
GACGAGCTGG CGCGTGCGCC CAGCACGCTG GCCGCGCGCC GCGCCGCAGC CGACTGA
 
Protein sequence
MRTSALARRD PEKSAMAMDY QPAELENYPG YHIRRLQQIA VAVFMEETQE FGVTPVQYAA 
LSAVLRQPGV DQRTLARMIG FDTSTIGSVI DRLEARGLMV RNTSPADRRV RLLSVTAEGA
ALLAAAEPSV LRAQQRMLEP LPQEQRGLFM DMMAVLVRQN DELARAPSTL AARRAAAD