Gene Daci_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3699 
Symbol 
ID5749282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4064778 
End bp4065815 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID641298798 
Producthypothetical protein 
Protein accessionYP_001564716 
Protein GI160899134 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00286748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.239602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCAT CCCCATCCAG CCGCCTCGGC GCCGCCCCCT CCCGCCGCAA GGCCCTTGCA 
GGCGCCGCCC TGCTGCTGGC CTCCATCGCC CCGCTGCATT GCGCCTGGGC ACAGGCAGGC
TCCAGCAGCG CCGCCAGCTT TCCCACGCGC CCCGTCACCG TGATCACGGC CTTTGCCGTG
GGCAGCGGCC CTGACGCCGT GCTGCGCATC GTGGGAGAAA AGCTTGCCGC CCGCTGGAAG
CAGGGCGTGA CCGTGGACAA CCGCCCCGGC GGCGGCGGCT TTGTCGCCAT CGAAGCCGCA
CGCCGCGCCA AGCCCGACGG CTACACCCTG CTGCAGCTCG ACAGCGAACA TGTCTCCGCC
CTGCCCTACC TCTACAAGCA GCGCAACTTC CATCCGCTGC AGCACTTCGA CCCGGTGGCG
CCGCTGTTCC TCACGCCCTT CTTCGTGGCC GTGCCCACGA ACTCGCCCTG GAAGAGCATG
GGCGACCTGA TCAAGGCGGC CAAGTCGGAG CCCGGCAAGG TCAGCTACGG CTCCTGGGGC
GTGGGCAGCC CCGGCCACCT GGGCGGCGAA TGGCTGGACT TCCTGACCGG CAGCAAGATG
ACCCATGTGC CCTACCGCGA GGTCAGCCAG CTCTACACCT CGGTGGCCAA TGGCGACCCG
GCCTGGAGCT TTGCCAGCAT TCCCTCCAGC CAGGGCATCT ACAAATCCGG CAAGATCCGC
TACCTGGCCG TGGCCGCACC CCAGCGCATC GCCCAGATGC CCGACGTGCC CACCGTGGCC
GAATCGGGCG GCCCCGCCGA CCTCATCGTG AACTCCTTCG TCTCCCTGCT GGCGCCCAAG
GGCGTGGACG CCGCCCTGCG CGACAGGATC CATGCCGACG TGGTCGCCGT GCTGCAGGAC
CCGCAGGTGC GCGAGAAATT CGCCACCTTC GCCTTCCAGC CCATCACCTG GGAAGTGCCT
GAGATGGAGA AATTCGCCAA GACCAAGGCG GACCAGTACA AGCTGCTGAT CCAGAAGGCG
AATATCAGCC TGGATTGA
 
Protein sequence
MKASPSSRLG AAPSRRKALA GAALLLASIA PLHCAWAQAG SSSAASFPTR PVTVITAFAV 
GSGPDAVLRI VGEKLAARWK QGVTVDNRPG GGGFVAIEAA RRAKPDGYTL LQLDSEHVSA
LPYLYKQRNF HPLQHFDPVA PLFLTPFFVA VPTNSPWKSM GDLIKAAKSE PGKVSYGSWG
VGSPGHLGGE WLDFLTGSKM THVPYREVSQ LYTSVANGDP AWSFASIPSS QGIYKSGKIR
YLAVAAPQRI AQMPDVPTVA ESGGPADLIV NSFVSLLAPK GVDAALRDRI HADVVAVLQD
PQVREKFATF AFQPITWEVP EMEKFAKTKA DQYKLLIQKA NISLD