Gene Daci_3698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3698 
Symbol 
ID5749281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4063510 
End bp4064763 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID641298797 
Producthypothetical protein 
Protein accessionYP_001564715 
Protein GI160899133 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0252348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.169871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGTC AGCGGATGAA AGTAGCGATC GTGGGGGGCG GCATCGGAGG CCTGTGCCTG 
GCATTGGCCC TGCATCAAAG AGGCATTGCC TGTGAAGTCT TCGAGGCCGT GCCCGAGGTC
CGCGAGATCG GCGCGGGCAT TACCCTGCTG CCGCATGCCA TGCGCGAGCT CAGCGACCTG
GGCCTGCAGC CGCAGCTGGA GGCCCTGGCG ATCGAGAACC TGGAGAGCGT GTTCTTCAAC
CGCTATGGCC AGTTCGTCTA CCGCGAGCCG CGCGGCCGCC ATGCGGGCTA CGAGCTGCCC
GAGCTGGGCA TCCACCGTGG CCGCCTGCAC CGCGTTCTCT TCGAGGCCGC CGTGCAGCGC
CTGGGACCGG GTGCCGTGCA CACGGGCCAC CGCTGCGTGC GCGTGGACCA GTCTGCCCAT
GGCGCCACCG TGCATTTCGC GCCGGATGCC CAGGGCCATG TGCCGCCGTC GGCCACGGCC
CACATCGTCG TGGCCTGTGA CGGCGTCAAC TCCGCCGTGC GGCGCCAGTT CTATCCGCAG
GAGGAGCTGG CCTTTGGCGG CATCAACACC TGGCGCGGCG TCTCGCGCTT CAAGCCCATC
CTCACGGGCA AGAGCTATCT GCGCATCGGC TCGGTCGATA CCGGCAAGAT GGTGATCTAT
CCCATTGAGG ACGATATCGA CGGCCAGGGC ATGCAGCGCA TCAACTGGGT GGCCGAGATC
CGCGACCCGC AGATGCGCAT GAACGACTGG AATCGCGCCG GCCGCATGGA GGATGTGCTG
GAGATTTTTG GTGGCTGGAC CTTCGACTGG CTGGATGTGC CGGCCCTGAT CCGCTCGGCC
GAGACCATCT TCGAGTACCC CATGGTGGAC AAGGACCCCG TGGACCAGTG GAGCTTCGGC
CGCGTGACCC TGCTGGGCGA TGCTGCCCAC CCCATGTATC CGCGCGGCTC CAACGGCTCG
GCCCAGGCCA TGCGCGATGC GCGGGTGCTG GCCGACCTGC TGGCCGCCGA CCCGCAAGGC
GACCCGCTGG CGCTGCTGGC CGCCTATGAG GCCAGCCGCC TGCCCGCCAC CAGCCAGGTG
GTGCTGACCA ACCGCTCCAC GCCGCCCGAC TTCATCATCA TGAAGGCGGA CGAACTCAGC
GGCGGTCAGC CCTTCGGCCA TATCGACGAG CTGATCAGTC AGGATGAGCT GCGTGCCATT
GCCCGCCATT ACGAGCAGGT GGCAGGGTTT GCGAATCCGC AGTCGCAGGG TTGA
 
Protein sequence
MESQRMKVAI VGGGIGGLCL ALALHQRGIA CEVFEAVPEV REIGAGITLL PHAMRELSDL 
GLQPQLEALA IENLESVFFN RYGQFVYREP RGRHAGYELP ELGIHRGRLH RVLFEAAVQR
LGPGAVHTGH RCVRVDQSAH GATVHFAPDA QGHVPPSATA HIVVACDGVN SAVRRQFYPQ
EELAFGGINT WRGVSRFKPI LTGKSYLRIG SVDTGKMVIY PIEDDIDGQG MQRINWVAEI
RDPQMRMNDW NRAGRMEDVL EIFGGWTFDW LDVPALIRSA ETIFEYPMVD KDPVDQWSFG
RVTLLGDAAH PMYPRGSNGS AQAMRDARVL ADLLAADPQG DPLALLAAYE ASRLPATSQV
VLTNRSTPPD FIIMKADELS GGQPFGHIDE LISQDELRAI ARHYEQVAGF ANPQSQG