Gene Daci_3697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3697 
Symbol 
ID5749280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4062470 
End bp4063474 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content63% 
IMG OID641298796 
Producthypothetical protein 
Protein accessionYP_001564714 
Protein GI160899132 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0583429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.151066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACTA CAAAAGAGGT CTACATGCGA AATTTTGTTG GCAGACGGCA ATTTTTGAAG 
ACGAGCGGAT TGGGAGTATT GGGTTTACCC GTAGCAGGTG CCATCGCCAG TACCGAGAGT
GTGCCTCTGA AATTGATTGT GCCTTTCACT CCGGGGACTG GAATCGACAC GATAGCGCGA
ACCATCGGAC CTTTGCTGGC CAAGCGCCAG GGCCGGCCCG TGGTGGTGGA GAACAAGCCG
GGCGCCTCTG GAAATATCGG CACCGAGGCC GTTGTGCGCT CGCCCGCCAA TGGCCAGACG
CTTTTGGTGA CAGTGAATAC CCTGGTGATG AATGCATCGC TGTATCCCAA ATTGCCATTC
AATCCGCTGA CAGACCTCGA ACCTGTGACG CTGACCAGTT GGGGGCAGTT GATTTTGGTG
ACGCCCACGG CCTCGGCCTA TCAGACGGCG GCCGATCTGG TGAAGGCCGC CAAGGCCTCG
CCGGGCCGCA TCAATTACGC GTCGCCGGGA GTGGGCACTC CGCACCATAT GGCGATGGAG
CTTTTCAAGA GCACGGCCGG GGTGTCGATC ACGCACATCC CGTATCGCGG AACAGGGCCG
GCGCTGACCG ACCTGCTGGG CGGCCAGGTG GAATGCATGT TCCTGCCCAT TCACGTGGCC
CTGGTGCACG TGAAGGCCGG CAAGTTGCGC GCGCTGGGCA TTGGCAGCCA CCAGCGCCAC
CCGCTGCTGC CCGATGTGCC CACGCTCAAG GAGGCCAAGG CGGGCGATGT GAACGTGGAT
ATGTGGTACG GCGTGTTTGC GCCGGCCGGC ATGCCGGCGG ACCAGGTCGA TGCCCTCAAT
CGCGAGATCC GCGCGATTTT GGCGTCGGAG GAAGTCCGGC ATGCCTTCGC GCCCCAGGGC
ATGGATCCGG CCGGCAGCAC GCCGGCCGAG TTCAAGGCCC TGGTGCAAAA GGACGCCCGG
CGCTGGGCCG ATCTGGTCAA GGCGCGGGGG ATTACCGCCG AGTAG
 
Protein sequence
MLTTKEVYMR NFVGRRQFLK TSGLGVLGLP VAGAIASTES VPLKLIVPFT PGTGIDTIAR 
TIGPLLAKRQ GRPVVVENKP GASGNIGTEA VVRSPANGQT LLVTVNTLVM NASLYPKLPF
NPLTDLEPVT LTSWGQLILV TPTASAYQTA ADLVKAAKAS PGRINYASPG VGTPHHMAME
LFKSTAGVSI THIPYRGTGP ALTDLLGGQV ECMFLPIHVA LVHVKAGKLR ALGIGSHQRH
PLLPDVPTLK EAKAGDVNVD MWYGVFAPAG MPADQVDALN REIRAILASE EVRHAFAPQG
MDPAGSTPAE FKALVQKDAR RWADLVKARG ITAE