Gene Daci_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3696 
Symbol 
ID5749279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4061925 
End bp4062380 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID641298795 
ProductMarR family transcriptional regulator 
Protein accessionYP_001564713 
Protein GI160899131 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.134225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.172711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA TGACGCCTGC ACCACTGCCG CTATATCAGC GCCCTGGCTT TTTGCTGCGG 
CGCGCCCACC AGATTTCGGT CGGCATTTTT GAAGAGCAAT GCCGCCCCCT GGGACTGACG
CCGCCACAGT ACGGCGCCCT GGTGCTGATC GACGCATCCC CCGGCTCCGA CCAAAGCTCC
CTGGCGCGCG CCATGGGCTT TGACAAGGTG ACCACGCTGC GCCTGGTGCG CGGGCTGGAA
GAGCGCGAAT ACGTGCACCG CGCCCTGAGC ACGCGCGACC GCCGCCAGCA CGAACTGACG
CTGACCGACA AGGGCCGCGC CCTTCTGGCC GCCAGCGTGC CGCTGGTGGA CCAGGCCTAC
CACCGCCTGG TGTCCCGCTG GAAGACGGCG AGCTGCAGGA GCTGCTGCGC CTGCTGGCCA
AGCTGGAGTC CGGCCTGGGC GCCAATGCCC GCGTGA
 
Protein sequence
MDTMTPAPLP LYQRPGFLLR RAHQISVGIF EEQCRPLGLT PPQYGALVLI DASPGSDQSS 
LARAMGFDKV TTLRLVRGLE EREYVHRALS TRDRRQHELT LTDKGRALLA ASVPLVDQAY
HRLVSRWKTA SCRSCCACWP SWSPAWAPMP A