Gene Daci_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3670 
Symbol 
ID5749253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4030994 
End bp4031329 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID641298769 
Productcupin 2 domain-containing protein 
Protein accessionYP_001564687 
Protein GI160899105 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0801583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CCCTTGCACT GACCGCTCAA GCCATCGATG TCCTGCCGTT TGGTGCGCGG 
CTGGCGGGCG CACGGACCTG CGCCCTGTTC AAGTCCCAGG ACATGGAGGT CATCCGCGTG
GTGCTGCGCG CCAGCCAGTC GCTGCCGCCG CACAAGGTGC CGGGCAGCGT CAGCCTGCAC
TGCCTGGAAG GCGAGCTGGA GGTGATGCTC GGCGAAAGCC GCCAGTCCCT GCAGGCCGGC
CAGCTGATGC ACCTGCCGGC CAACATGGCG CATGCGGTAC GCGCCATCGA AGACACCTCC
GCTCTGGTCA CCATCGTTCT GTGTGACGCG TCCTGA
 
Protein sequence
MATPLALTAQ AIDVLPFGAR LAGARTCALF KSQDMEVIRV VLRASQSLPP HKVPGSVSLH 
CLEGELEVML GESRQSLQAG QLMHLPANMA HAVRAIEDTS ALVTIVLCDA S