| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3657 |
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| Symbol | |
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| ID | 5749240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4015964 |
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| End bp | 4018171 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298756 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001564674 |
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| Protein GI | 160899092 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.558128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.251953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC CGGTGCGCGC GTCCACGCAC GCCTTTCGTC TCCATCCACT GGCCACGGCG
CTGTGCTGCG CGCTGGGCGC CGCATGGACG CCTGCCGCGC ACGCGCAGGC CCTGGCCGAG
GCGGCACTGC CCGCCGTCGA AGTCTCCGAC CAGGCCACGG CCGACGCCAA CGGCCTGCTG
CCGCTGAACA AGACCGTGGG CACCGCCAGC CGCCTGGGCC TGACGGCGCG CGAGACACCG
GCCTCGGTGC ACATCGTGGA CCGCGCCGCC ATCGAGGCGC GCGGCGCCCA GGACACGCAG
GAGATCCTGC GCTCCATTCC GGGCGTCACG GCCTACAGCC CGCCCGGCAA CATCGGCATC
AGCTACCGGG GCTTCGGCAC GGGGTCGGTC AGCCAGCTGT TCAACGGCAT CAACCTGCAG
TACTCCATTG CGGCACGGCC CGTGGACAGC TGGATCTACG ACCGGGTGGA GGCCATTGGC
GGTGCCTCCG GCTTTCTCTA CGGCGCAGGC GGCGTGGGCG GCACGCTGAA CTACATCACC
AAGCTGGCCC AGCGCGACAG CTTCACCGAA GGCCAGCTAC GCCTGGGCAG CTACGGGCTG
AAAGAAGCCT CCGTCGGGCT GAACCGCCGC CTGGGCGATG CCACCGACAG CCAGGGCACC
ACCCATTACC TGCGCCTGGA CCTCAACCAC CGCGATGCCG GAAGTTGGGT GGGCGGCACG
CAGTCGCGCT CCACGCAGCT GGCGGCCTCG CTGCTGTCCG ACCTGGGTGG CGGCCTCACG
CACACCCTGG CCTACGAAGC CCAGCATGAG CGGGTGGACC GCCCGTACTG GGGCACGCCG
CTGCTCAACC CGCTGCGCGG CCAGGCGCGC ATTGACGAGG CCACCCTCGG CAAGAACTAC
AACAGCGCCG ACGGCCTGTA CGCCCAGCGC GTGCAGTGGC TGCGCTCCAT CACCGAATGG
CGGGCCAGCG ACCGGCTCAA GCTGAGCAAC ACCTTCTACG CCTATGACGC GCTGCGCGAC
TACCGCAACG TGGAGACCTA CCGCTTCACG CCCGACAACA GCGCGGTGGT GCGCTCGGCC
GCGCTGCTGC AGCGCCATGA CCAGCGCATG GTGGGCGACC GCATCGAAGG CAGCTACCTG
GGCGAGCTGG CCGGCCGGCG CAGCGAATGG GCCTTTGGCC TGGATGTGAG CGTGAACCGG
CAGACGCGCT TTCCGAACAG CCTGTCGGGC ACGGTGAGCA CGGTCAACCC GTACGACTTC
ACCACCGAGA ACTTCTACGA CATCCCAGGC ATGGCGCCGG GCTTCAGGCC TGACCGCGAC
AACAAGGTCA CCACCACCGC CCTGTACCTG GAAAACCGCA CGGCCCTCAC CCCGGCCCTG
CACCTGCTGA CGGCGCTGCG CCATGAACGC ATCGATGTGG ACCTGACCAA CCGGCGCGAT
GTAACGCCCG CGCTGCCCGC CAGCTACAGC CGCAGCTATA GCCCGACGAC CGGGCGCGTG
GGCCTGGTCT GGGATGCCAC GCCCGAGGCC AATCTCTACG CCCAGTTCTC CACGGCGGCC
GATCCGCCGT CGGGCATGCT GATGGGCGCC TCGTTTGCCG ACGCCATCAA CAACACCGGG
CTGACCACGG GCCGCCAGGT GGAGGCGGGC AGCAAGCTGT CGTTCTGGCA GGGCAAGGGA
ACGGCGGCGC TGGCGGTCTA TCACATCACG CGCCGCAACA TCTCCACCCA GGACCCGCAG
GACAGCACGC GCACGGTGCT GGTGGGCCAG CAGTCCTCGC GCGGGGTGGA GCTGTCCATG
GGCCTGGCGC CCACGCCGCG CTGGTCGGTC CAAGGCAACT GGAGCCATGT GGACGCGCGC
TATGACAACT ACCAGCAAGG CGGCGTGTCC CTGGCGGGCA AACGGCCCAC GAACACGCCC
GCCAGCGTGC TCAACCTCTG GACCAGCTAC CGCATCACGC CGGCGCTGGA GGTCAACGCC
GGGCTGCGCC GCGTGGGAGG CATCTATGCC GATGCGGCCA ATACCCTGTC CTGGCCCGCC
TACACGCTGC TGGACCTGGG CCTGAGCTAC CGGATCGACC CGCGCATGAC CGTGATCGCA
CGGCTGCGCA ATGCCACGGA CCGCGTCTAC GCCGCCAGCC TGACCAGCAC CATGGCCTAC
CTGGGGGCGC CGCGCACGGC CGATATCACG CTGCGCGTGG CGTTCTGA
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| Protein sequence | MAAPVRASTH AFRLHPLATA LCCALGAAWT PAAHAQALAE AALPAVEVSD QATADANGLL
PLNKTVGTAS RLGLTARETP ASVHIVDRAA IEARGAQDTQ EILRSIPGVT AYSPPGNIGI
SYRGFGTGSV SQLFNGINLQ YSIAARPVDS WIYDRVEAIG GASGFLYGAG GVGGTLNYIT
KLAQRDSFTE GQLRLGSYGL KEASVGLNRR LGDATDSQGT THYLRLDLNH RDAGSWVGGT
QSRSTQLAAS LLSDLGGGLT HTLAYEAQHE RVDRPYWGTP LLNPLRGQAR IDEATLGKNY
NSADGLYAQR VQWLRSITEW RASDRLKLSN TFYAYDALRD YRNVETYRFT PDNSAVVRSA
ALLQRHDQRM VGDRIEGSYL GELAGRRSEW AFGLDVSVNR QTRFPNSLSG TVSTVNPYDF
TTENFYDIPG MAPGFRPDRD NKVTTTALYL ENRTALTPAL HLLTALRHER IDVDLTNRRD
VTPALPASYS RSYSPTTGRV GLVWDATPEA NLYAQFSTAA DPPSGMLMGA SFADAINNTG
LTTGRQVEAG SKLSFWQGKG TAALAVYHIT RRNISTQDPQ DSTRTVLVGQ QSSRGVELSM
GLAPTPRWSV QGNWSHVDAR YDNYQQGGVS LAGKRPTNTP ASVLNLWTSY RITPALEVNA
GLRRVGGIYA DAANTLSWPA YTLLDLGLSY RIDPRMTVIA RLRNATDRVY AASLTSTMAY
LGAPRTADIT LRVAF
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