Gene Daci_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3652 
Symbol 
ID5749235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4012106 
End bp4012666 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID641298751 
Productcarbonic anhydrase 
Protein accessionYP_001564669 
Protein GI160899087 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0664079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.293662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA AGAACCCGCG CGGCGACCTG CCGCGCATCC ATGCCAGCGC CTTCGTGGAC 
CCCACGGCCA TCCTGTGCGG ACTGGTGGTC GTGGAAGAGA ACGTCTTCAT CGGCCCCTAT
GCGGTGATCC GTGCCGACGA GATGGATGCG GAAGGCCACA TCGACCCCAT CGTGATCGGT
GCGCACTCCA ACATCCAGGA CGGGGTGGTG ATCCACTCCA AGTCCGGCGC GCGCGTCAGC
GTGGGGCAGC ACACCTCGAT CGCCCATCGC GCCATCGTCC ACGGGCCCTG CACCGTGGGC
AATGGCGTGT TCATCGGCTT CAACAGCGTG CTGTTCAACT GCGTGGTCGA TGACGGCTGC
GTGGTGCGCT ACAACGCCGT GGTCGATGGA TGCCACCTGC CGCCAGGCTT TTATGTGCCG
TCCACTGCGC GCATAGGCCC GGAGACCGAC CTGTCCACGC TGGCCCAGGT GCCCGCCGAC
GCCAGCGATT TCTCCGAGGA CGTGGTCCGC ACCAACAACG AATTGGTGCG CGGCTACAAG
GCCATCCACA ATGAGTTCTG A
 
Protein sequence
MIRKNPRGDL PRIHASAFVD PTAILCGLVV VEENVFIGPY AVIRADEMDA EGHIDPIVIG 
AHSNIQDGVV IHSKSGARVS VGQHTSIAHR AIVHGPCTVG NGVFIGFNSV LFNCVVDDGC
VVRYNAVVDG CHLPPGFYVP STARIGPETD LSTLAQVPAD ASDFSEDVVR TNNELVRGYK
AIHNEF