Gene Daci_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3648 
Symbol 
ID5749231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4009240 
End bp4009641 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID641298747 
Productferric uptake regulator family protein 
Protein accessionYP_001564665 
Protein GI160899083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0129314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.497485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT CCCTGACCAC CAAGCAACAA CGCGTGCTCG ACACGCTGCG CCAGGCCGGC 
GCGCCGCTGA CGGCCTACGC GCTGCTCGAC CAGTTGCGGG ACCACGGCTT GACGGCTCCT
ACCCAGGTCT ACCGCGCGCT GGACAAGCTG GCCGAGCAGG GCGTGGTCCA TCGCCTGGAG
TCGCTGAATG CCTATGTCTG CTGCTCGCAT CCGGACGAGG GCAGCCATGA TTTCTCGGCC
TTTGCGATCT GCGACAGCTG CGGCCAGGTC GATGAGTTCG TGGACGACGC GCTCAACCGC
TGCCTGGGCA GCTGGGCGCA TGGCAATGCT TTTGCGCTGG CCCATTCGAA CATCGAGCTG
CATGGCAAGT GCTCCGCCTG CTGCACCGCG CTCCCCGCCT GA
 
Protein sequence
MSHSLTTKQQ RVLDTLRQAG APLTAYALLD QLRDHGLTAP TQVYRALDKL AEQGVVHRLE 
SLNAYVCCSH PDEGSHDFSA FAICDSCGQV DEFVDDALNR CLGSWAHGNA FALAHSNIEL
HGKCSACCTA LPA