| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3578 |
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| Symbol | |
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| ID | 5749162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3925147 |
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| End bp | 3925743 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298679 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001564597 |
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| Protein GI | 160899015 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00935563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0256006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA GCCGGGCCAG CATGATCGAG GAGACACGCG CCAAACTCAT CGAGGCTGCG
CGCGAGGCCT TTGGCAGCCA GGGCTATTCC CAGGCCTCCA TGGACGAATT GACGGCCAAG
GCCGGGCTGA CGCGCGGCGC GCTGTACCAC CATTTCGGTG GCAAGCCGGG CCTGCTGGCC
GCCGTGGTGG CGCAGATGGA TGCCGAGATG GACGCACGCC TGGAGCAGGT GCTGGCCGAC
CATGCCGACC CCTGGGAGGG GTTCCTGGCC TACTGCCGCG CCTACCTGGC CATGGCGCAG
GAGGGCGAGA TACGCCGCAT CGTGCTGCAG GATGCGCGCG CCGTGCTCAC GGGCACGGAC
CAGGGCGAGC AGCACCGCGC CTGCATCGCC TTCGTGGCCG GCTACCTGGA GCAACTCATG
GAGCGCGGCG TGATCGTGCG TGCCAATCCT CTGGCCATGT CGCGGCTGCT CAATGGCTGC
CTGGTGGAGT CGGCATTCTG GATTGCCGAG GAAGGGGCGC CCCCCGAACG CCTGCAGCAG
GCGCTGCAGG CGCTGGAGTT GACGCTCAAG GGGTGGAAGG CGCCTGCGAG GGGCTGA
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| Protein sequence | MRKSRASMIE ETRAKLIEAA REAFGSQGYS QASMDELTAK AGLTRGALYH HFGGKPGLLA
AVVAQMDAEM DARLEQVLAD HADPWEGFLA YCRAYLAMAQ EGEIRRIVLQ DARAVLTGTD
QGEQHRACIA FVAGYLEQLM ERGVIVRANP LAMSRLLNGC LVESAFWIAE EGAPPERLQQ
ALQALELTLK GWKAPARG
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