Gene Daci_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3552 
Symbol 
ID5749136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3900287 
End bp3900685 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID641298653 
Producthypothetical protein 
Protein accessionYP_001564571 
Protein GI160898989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0993493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00882594 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACATTCA AACGAATCGC CGCTGTAGGA CTTGCATCTG TGGGGCTGGC GTCAGCCCTT 
GCCCTGACTG GATGCGTTGT TGCGCCGGAG CGGCACCCAC GACCGGCGCC TGCTGTCCAC
GTCCAAGAGC GCGTGATGCC GGAAGTGATC GTGGAAGAGC GCGGTGCACC CCCTGCGCCT
GGTTGGCACT GGGTGAACGG GTACTGGCGC TGGGAGCGGG ACCAGTGGGT TTGGCAGCGA
GGTCACTGGG TTGCCAACAC CGTGCCGCCA ATGCCTCCCG TCATCGTCGA GGTGAGGCCA
GCGCCACCCA GCCCGGTTCA CTACTGGGTG CCTGGCCACT GGGTGTGGCG CGCGGACATC
AACAACTGGT TCTGGGTGAA GGGCCAGTGG CACGGCTGA
 
Protein sequence
MTFKRIAAVG LASVGLASAL ALTGCVVAPE RHPRPAPAVH VQERVMPEVI VEERGAPPAP 
GWHWVNGYWR WERDQWVWQR GHWVANTVPP MPPVIVEVRP APPSPVHYWV PGHWVWRADI
NNWFWVKGQW HG