Gene Daci_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3465 
Symbol 
ID5749050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3796507 
End bp3796929 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID641298568 
Producthypothetical protein 
Protein accessionYP_001564486 
Protein GI160898904 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.286373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAACCT CAACTCCCCG GGTGGCGACA TCTTCGAGGG CATGGCCATC TACACCTGCT 
GCGCGAGCAC AAGGCAAAGG TGATCATCCG CGTGCTGGGC GTGGCCGCCT CGGTGGCTTC
GGTGATTGCC ATGGCCGGCG ACGAGATCCT GATGGGCGAT GGATCGTTTC TGATGATCCA
CAACGCCTGG CCGTGGCCGT CGGAAACCGC CACGACATGA CGGACACAGC CGCCGTGCTG
GCGCCGTTCG ATGCCGCGAT GGCTGCGCTG TATGCCCACC GCTCCGGGAT CGCCGAGGCC
GAGGCCGCGA TGCTGATGGA TCGCGAAACC TGGATCGGTG CGCAACAGGC TGTCGATGAC
AGCTTCGCCA CGGGCCTGCT GCCCAGCTCG GAGATCACCC GTCGAGCCGC CTCGCAGAGA
TGA
 
Protein sequence
MTTSTPRVAT SSRAWPSTPA ARAQGKGDHP RAGRGRLGGF GDCHGRRRDP DGRWIVSDDP 
QRLAVAVGNR HDMTDTAAVL APFDAAMAAL YAHRSGIAEA EAAMLMDRET WIGAQQAVDD
SFATGLLPSS EITRRAASQR