Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3461 |
Symbol | |
ID | 5749046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3791686 |
End bp | 3792993 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641298564 |
Product | integrase family protein |
Protein accession | YP_001564482 |
Protein GI | 160898900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.538189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC CCTCCAAAAA TCAACCGGTG GACTTGTCCA CACCCATCAA CATCACCCCC AGCGTGATCG AGCGCCTCGT GTGCCCAGAA GGCAAAGACC AGGCATTCCT GCGCGACGCC CTGGTCCCCG GCCTGCGCGT GCGCGTGTCC GCCCACGGGG CCAAGTCTTT CGTCTTCGAG CGCAAGGTGG GGCAGAAGAC CGTGCGCAAG ACCCTGGGCG ATGTGCGCGT GCTAACTGTC GACGAGGCCC GTGCAGCGGC ACGGCGCGCT CACGGCACCC TGGACGCAGG CGAGAGCCTG AACACGCCGG CCGCCCCGCC CGAACCGACG CACGACGCCA CTGTGCAAGA AGCGTGGTCA GCGTATCTCG CAGACCGAAA AAGCCAATGG GGCGAGCGGC ACTATGCAGA CCACGAGAAG CTGGCGAGGC CGGGCGGCAA GAAAGCGACC CGGGGAACCA GGGGGCGAGG CGAGACAGTA CCGGGCATCC TCTATCCGTT GATGGCGCTA CCTTTGACAG ACCTGACCCC CGCAACGATC GAGGCCTGGG CCGCCGAGCA AGCCAAGACA GGCCCGACCC AAGGGCGCCT CGGTGCGCGG ATGATCAGCG CATTTATCAA CTGGTGCGAA GACCAGCCAG CCTATGCCGG CCTCGCACCC CGTGGCGCTG CGGTCGTGAA GACAAAGCGT GTGCGCGAGA CCTTAGGGAA GGCGCGAACC AAGAGCGATG CGCTGCTGCG CGAGCAGCTC GCCCCCTGGT TCCGCGCAGT GCTCACCATG AACAACCCGG CCATGTCGGC GTACCTGCAG GTGCTGCTGC TGACAGGCGC GCGCCCGGGT GAAGTTCGGA CTATCCGGTG GGCGGACATT GACTGGGCTT GGGCAGGTCT GAGCATCCGG GACAAAGTGG AGGGTGACCG CATCATCCCG CTGACGCCCT ATGTTCGATC GCTGATCGAC GGCCTGTCGC GGCGCAGTGA GTGGGTCTTC ACCAGTGCGG ACGGGTCGTG CCTCTACAGC CCCAATCATG CGCACGACAA GGCCTGCCAT GTTGCGGGGG TGCCGGCCGT CACCCTGCAC GGACTGAGGC GCTCGTTCAA GAGCCTGACC GAGTGGCTGG AGATGCCTGC TGGTGTCGTG GCCCAGATCA TGGGGCACAA GCCCAGCGCC ACGGCGGAGA AGCACTACAC GGTGCGCCCT CTGGACCTGC TGCGCATGCA CCACGAGAAG ATCGAGGCCT GGGTTCTTGC CCAAGCTGGC GTGCCGTTCG TTGCACCGAA GATAGGCCAG CGGCTGCAGG TTGTTTAG
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Protein sequence | MARPSKNQPV DLSTPINITP SVIERLVCPE GKDQAFLRDA LVPGLRVRVS AHGAKSFVFE RKVGQKTVRK TLGDVRVLTV DEARAAARRA HGTLDAGESL NTPAAPPEPT HDATVQEAWS AYLADRKSQW GERHYADHEK LARPGGKKAT RGTRGRGETV PGILYPLMAL PLTDLTPATI EAWAAEQAKT GPTQGRLGAR MISAFINWCE DQPAYAGLAP RGAAVVKTKR VRETLGKART KSDALLREQL APWFRAVLTM NNPAMSAYLQ VLLLTGARPG EVRTIRWADI DWAWAGLSIR DKVEGDRIIP LTPYVRSLID GLSRRSEWVF TSADGSCLYS PNHAHDKACH VAGVPAVTLH GLRRSFKSLT EWLEMPAGVV AQIMGHKPSA TAEKHYTVRP LDLLRMHHEK IEAWVLAQAG VPFVAPKIGQ RLQVV
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