Gene Daci_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3412 
Symbol 
ID5748998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3745146 
End bp3745580 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID641298517 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001564435 
Protein GI160898853 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.234898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00117698 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCAATC AGACAGACCG CAAATTCCTG GCCTCGGCAG AAGCCATCGG GCAAATCTGG 
AGCAAGGACC CTTCCACGCG CGTCGGCGCC GTGGCCGTGG GCAACACCAA GAACCAGGTT
GCCTTCGGCT ACAACGGCCT GCCGCCGGGC ATCGCAGACA CTGATGAGCG ACTGCAGAAC
CGAGACCTGA AGCTCTCGCT CACGCTCCAC GCCGAAGAGA ACGCCCTGGC CAACGCCTCG
TTCGTCGTGC GCACCGTGTA TGTTACCCAC CACCCGTGCG CCGGTTGCGC CCTGCGCATT
CTTGCCAAGC GCAGCGTGCG CCGGGTGGTC TACATCACCC GGCCCGACTT CGAGGCCCGT
TGGGCAGCCA GCCTGACCGA GGCCCGCATG CTGTTTGAAG AGGCTGGCGT GCAGATCGAG
GGCTGTGCGC TGTGA
 
Protein sequence
MINQTDRKFL ASAEAIGQIW SKDPSTRVGA VAVGNTKNQV AFGYNGLPPG IADTDERLQN 
RDLKLSLTLH AEENALANAS FVVRTVYVTH HPCAGCALRI LAKRSVRRVV YITRPDFEAR
WAASLTEARM LFEEAGVQIE GCAL