Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3412 |
Symbol | |
ID | 5748998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3745146 |
End bp | 3745580 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298517 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_001564435 |
Protein GI | 160898853 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.234898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00117698 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCAATC AGACAGACCG CAAATTCCTG GCCTCGGCAG AAGCCATCGG GCAAATCTGG AGCAAGGACC CTTCCACGCG CGTCGGCGCC GTGGCCGTGG GCAACACCAA GAACCAGGTT GCCTTCGGCT ACAACGGCCT GCCGCCGGGC ATCGCAGACA CTGATGAGCG ACTGCAGAAC CGAGACCTGA AGCTCTCGCT CACGCTCCAC GCCGAAGAGA ACGCCCTGGC CAACGCCTCG TTCGTCGTGC GCACCGTGTA TGTTACCCAC CACCCGTGCG CCGGTTGCGC CCTGCGCATT CTTGCCAAGC GCAGCGTGCG CCGGGTGGTC TACATCACCC GGCCCGACTT CGAGGCCCGT TGGGCAGCCA GCCTGACCGA GGCCCGCATG CTGTTTGAAG AGGCTGGCGT GCAGATCGAG GGCTGTGCGC TGTGA
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Protein sequence | MINQTDRKFL ASAEAIGQIW SKDPSTRVGA VAVGNTKNQV AFGYNGLPPG IADTDERLQN RDLKLSLTLH AEENALANAS FVVRTVYVTH HPCAGCALRI LAKRSVRRVV YITRPDFEAR WAASLTEARM LFEEAGVQIE GCAL
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