| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3388 |
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| Symbol | tmk |
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| ID | 5748973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3725636 |
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| End bp | 3726322 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298492 |
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| Product | thymidylate kinase |
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| Protein accession | YP_001564411 |
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| Protein GI | 160898829 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.159825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0629111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACTG CAACTCCCGC CGGCCTGTTC ATCAGCTTCG AAGGCATCGA TGGCGCCGGC
AAGTCCTCGC ACATCGCGTC GCTGGCCCAG GCTTTCCGTG ACCAGGGGCG CACGGTGACG
CTCACCCGCG AGCCCGGCGG CACGCCGCTG GCCGAAAAGC TGCGCGCGCT GATGCTGCAC
GACGCCATGG ACCCGCTGAC CGAGGCCCTG ATCGCCTTTG CCGCGCGACG CGACCACTTG
GTGCAGGTGA TCGAGCCCGC GCTGGCGCGC GGTGAAGTCG TGCTCTGCGA CCGCTTCACC
GATGCCACCT TTGCTTACCA GGGTGCGGGC CGGGGCTTCG ACCTGCAGCC GCTGGCCACG
CTGGAGCGCA TGGTGCAGAC GGGCACGGCC CCCCAGCCCG ATCTGCTGCG CGAGCCCCAC
CTGACGCTCT GGTTCGACCT GCCCGCCGAG GTGGCCGCCG AGCGCTTGGC CTCGGCCCGT
GTCCCGGACC GCTTCGAGTC TGAGCCCGGC AGCTTTTTCG CACGCGTGGC CCAGGGCTAT
GCGGCGCGCG CTGCCGCCGC GCCCCAGCGC TTTGCGCGCA TCGACTCCAA CGCCAGCCGG
CATGCGGTCT GGCAGCAGAT CACCCAGGTC ATGGTGCGCC GGGGCTGGCT GGCCATCATG
GTCGGCGGAC AGGCAGGTGC GGCATGA
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| Protein sequence | MTTATPAGLF ISFEGIDGAG KSSHIASLAQ AFRDQGRTVT LTREPGGTPL AEKLRALMLH
DAMDPLTEAL IAFAARRDHL VQVIEPALAR GEVVLCDRFT DATFAYQGAG RGFDLQPLAT
LERMVQTGTA PQPDLLREPH LTLWFDLPAE VAAERLASAR VPDRFESEPG SFFARVAQGY
AARAAAAPQR FARIDSNASR HAVWQQITQV MVRRGWLAIM VGGQAGAA
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