| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3367 |
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| Symbol | |
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| ID | 5748952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3696575 |
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| End bp | 3698017 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298471 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001564390 |
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| Protein GI | 160898808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.324035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCG CTTTACAAAC AAGAAATATG GGCACTGCAC AATCGTGCGA TGCCCCCAAC
GACTTCGCTG CTCCCATGAT TTTTGACGTG CCCTTTTCGC CGAGCCCGCG CCTTGCTGCG
CCTTCCGATT CCCAGCCCGG CGCAGGGCAC GTACAAGTTT CCGCCTCGCC GGCCGGTGGC
CGGCGCATCG GCACCGCCGT GCTGTGCGCA CTGGCGCTGG CCGCGAGCCT TGCGGCCTGC
TCCAAGAAGG ATGCCGCACC TGCCGCCACG GCCAAGGCCG CGCCCGAGGT GGGCGTGGTC
ACGCTGCAAA AGCAGAGCCA GCAGCTGGAC GCCACGCTGC CGGGCCGCAC GCGCGCCTCG
CTGACCGCCG AAGTGCGGCC CCAGGTGTCG GGCATCGTGC AAAAGCGCTT GTTCACCGAG
GGCGCCCTGG TGCGCCAGGG CCAGCAGCTC TACCAGATCG ACGCGGCCTC GCTGCGCGCC
ACCGAGGCCA GCGCCCAGGC GGCGCTGGCC AAGTCCGAGG CCAGCGCCCG CACGCTGGAG
GCCACGGCGC GGCGCAACGC CGAGCTGGTC AAGATCGATG CCATCAGCCA GCAGGCCTTC
GAGGAAAGCC AGGCCGCCGC AGCCCAGTCG CGTTCTGACG TGGCCGTGGC CAAGGCCAAT
CTGGAGACCG CGCGCATCAA CCTCAAGTAC AGCCGCATCG AGGCGCCCAT CAGCGGGCGC
ATCAGCCTGT CCACCGTGAC GCCGGGCGCG CTGGTGACGG CCAACCAGAC CGAGGCGCTG
ACCTCCATCG TGCAGCTGGA CCCCATGTAT GTGGACTTCA CCCAGTCCAC CAGCGAGCTG
CTGCAGCTCA AGCGCGACTG GGATGCCGGG CGCTTCCAGA AGGTGGAGGG CGACAAGGTG
GCCGTGCGCA TCCGCCTGGA CGATGGCACG GACTACAGCC ACCAGGGCAA GCTGCAGTTT
GCCGGCGTGA TCGTCAATGC CACCACGGGC AGCGTGACGC TGCGCGCCGT GGTGCCCAAC
CCGCAGGGCG TTCTCATGCC CGGCATGTAT GTGCAGGCGC TGCTGCCCAC GGGCCTGGCG
CCCGAGGCGC TGCTGGTGCC CCAGCAGTCG GTGACGCGCG ACCTGACCGG CAAGGCCAGC
GTGCTGGTGG CCAAGGCCGA CGACGTGATC GAGCGCCGGC CCGTGAACAT CGACCGTGCC
GTGGGCAATA TGTGGCTGCT GCAGGACGGC CTGTCGGCCG GCGAACGCGT GGTGGTCGAT
GGCTTCCAGC GCATCAAGCC CGGCGACAAG GTGCGCGCCG TGGAGGTGGA CCTGCGCGCC
AAGGCCCAGG CCCGCAAGGG CAAGCCGGCC GACGGGCCGG CAGCACCTGG CGCGGCGGAC
AAGGCGCCTG CTACAGCTCC TGCACCAGCA CCGGCAGCGG CTCCTGCTCC GGCCGCCGGC
TAA
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| Protein sequence | MPSALQTRNM GTAQSCDAPN DFAAPMIFDV PFSPSPRLAA PSDSQPGAGH VQVSASPAGG
RRIGTAVLCA LALAASLAAC SKKDAAPAAT AKAAPEVGVV TLQKQSQQLD ATLPGRTRAS
LTAEVRPQVS GIVQKRLFTE GALVRQGQQL YQIDAASLRA TEASAQAALA KSEASARTLE
ATARRNAELV KIDAISQQAF EESQAAAAQS RSDVAVAKAN LETARINLKY SRIEAPISGR
ISLSTVTPGA LVTANQTEAL TSIVQLDPMY VDFTQSTSEL LQLKRDWDAG RFQKVEGDKV
AVRIRLDDGT DYSHQGKLQF AGVIVNATTG SVTLRAVVPN PQGVLMPGMY VQALLPTGLA
PEALLVPQQS VTRDLTGKAS VLVAKADDVI ERRPVNIDRA VGNMWLLQDG LSAGERVVVD
GFQRIKPGDK VRAVEVDLRA KAQARKGKPA DGPAAPGAAD KAPATAPAPA PAAAPAPAAG
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