| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3360 |
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| Symbol | |
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| ID | 5748945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3689333 |
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| End bp | 3690124 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298464 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_001564383 |
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| Protein GI | 160898801 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.319469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.757652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCA ATGTGCAGCA ACTTTTCGAC CTCACCGGCA AGACGGCCCT GGTGACCGGC
GGCTCGCGCG GCCTGGGCCT GCAGATGGCC CATGCGCTGG GCGAGGCGGG CGCCAGGATC
ATGCTGAGTT CGCGCAAGGC CGCCGACCTG GAGGAAGCCG CTGCCGAGCT GCAGGCCGCA
GGCATCGACG CCCGCTGGAT CGCCGCCGAC TGCGCCAACG AGGCCGACAT CGAGCGCCTG
GCCGCCGAGA CCCTGGAGCG CCTGGGCCAG GTGGACATCC TCATCAACAA CGCGGGCGCC
AGCTGGGGCG CGCCGGCCGA GGAGCACCCG GTGGCCGCAT GGGACAAGGT GATGAACCTC
AACGTGCGCG GCTACTTCCT GCTGAGCCAG CAGATCGCGC GGCGCAGCAT GATCCCGCGC
AAGACCGGGC GCATCATCAA CCTGGCCTCC ATCGCAGGGC TGGGCGGCAA CCCGCTGGGC
ATGAAGACCA TTGCCTACAA CACCTCCAAG GGCGCGGTCA TCAACTTCAC GCGCGCGCTG
GCCGGCGAGT GGGGCGTGCA CGGCATCAAC GTCAACGCCA TCTGCCCGGG CTTCTTCAAG
ACCAAGATGG CCAGCGTGCT GATCGAGACC CTGGGCGAGG ATGAAATGAA ATCCCACGCC
CCGCTGCGCC GCCTGGGCGA CGACGAGGAC CTCAAGGGCC TGACCCTGCT GTACGCCAGC
GACGCGGGCA AGCACATCAC GGGCCAGTGG GTGGCCGTGG ACGGCGGCGT CAGCGCCCTG
GTGGGCGGTT GA
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| Protein sequence | MTRNVQQLFD LTGKTALVTG GSRGLGLQMA HALGEAGARI MLSSRKAADL EEAAAELQAA
GIDARWIAAD CANEADIERL AAETLERLGQ VDILINNAGA SWGAPAEEHP VAAWDKVMNL
NVRGYFLLSQ QIARRSMIPR KTGRIINLAS IAGLGGNPLG MKTIAYNTSK GAVINFTRAL
AGEWGVHGIN VNAICPGFFK TKMASVLIET LGEDEMKSHA PLRRLGDDED LKGLTLLYAS
DAGKHITGQW VAVDGGVSAL VGG
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