Gene Daci_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3345 
Symbol 
ID5748930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3670615 
End bp3671421 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID641298449 
ProductDNA-binding transcriptional repressor LldR 
Protein accessionYP_001564368 
Protein GI160898786 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.956466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.392938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG CCGATCAAGT TGTCGAGAAA TTGCTTGCCC TGGTGCAGGC CAGCGGAGTG 
CAGCCCGGAC AGCGGCTGCC CGCGGAGCGG CAACTGGCGG CCGAGCTGGG TGTCTCGCGC
ACCTCGGTGC GCGAGGCCAT ACAGAAACTC ACCAGCCAGG GCGTGCTGGT GGCGCGGCGC
GGCGATGGCA CCTACCTGCA GGAGCCGGCG CCGGCTGCCG AGCCTGCGGA CTGGCTCAAG
GACGCCATGC GGCCGCTGGC CGGCCTCATG GAGTCCGACT CCCACTACCG TTACGACGTG
CTGGAAACCC GCCATGCGCT GGAGACCAGC ACGGCCTGGC TGGCCGCCCA GCGCGCCACG
GAGCGCGACA AGGACCATAT CCAGCGCTGC TTCGAAGTGA TGATCCAGCA CCAGCAAAGC
GGTCACGCCG AGCTGGCGGC GCGTGCCGAC GCGCAGTTCC ACCTGGCCAT TGCCGAGGCC
TCGCACAACC TGGTGCTGGT GCAGGTCATG CACAGCCTGT TCACCGTGGT GCTGTCCACG
GTGGAGCGCA ACCGCCACGA CATGTTCCGC CTGAGCGCCC CCCAGACCCT GCAGGAGCTG
ACCGTGCAGC ACCAGAGCCT GATGCAGGCC ATCCTGGACG GCGACCCGCA GCGCGCCCGC
GAATGCATCG GCGAGCACCT GGAGCATGTT CGCACCACCA TCCAGCGCCT GGACGAGGAC
CGCGCGCGGC GCGAGCGCTC CATGCGGCTG CCTCTGGACG CCGCGCCCGC GCTGCTGCCC
ACTTCAGACC TGATACGAAA GACATGA
 
Protein sequence
MRVADQVVEK LLALVQASGV QPGQRLPAER QLAAELGVSR TSVREAIQKL TSQGVLVARR 
GDGTYLQEPA PAAEPADWLK DAMRPLAGLM ESDSHYRYDV LETRHALETS TAWLAAQRAT
ERDKDHIQRC FEVMIQHQQS GHAELAARAD AQFHLAIAEA SHNLVLVQVM HSLFTVVLST
VERNRHDMFR LSAPQTLQEL TVQHQSLMQA ILDGDPQRAR ECIGEHLEHV RTTIQRLDED
RARRERSMRL PLDAAPALLP TSDLIRKT