Gene Daci_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3314 
Symbol 
ID5748899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3635752 
End bp3636927 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID641298418 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001564337 
Protein GI160898755 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0123072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG CCGTGATCGT TTCCACCGCC CGCACGCCCC TGGCCAAAAG CTGGAAGGGC 
TCCTTCAACA TGACCCATGG CGCCACGCTC GGCGGCCATG CCGTGCAGCA CGCCGTGCAG
CGCGCAGGCA TCGACCCTGC CGCCGTCGAT GACGTGATCA TGGGCTGCGC CAACCCCGAA
GGCGCCACCG GCATGAACAT TGCGCGCCAG ATCGCGCTCA AGGCCGGCCT GCCCATCACC
GCATCGGGCA TGACCATCAA CCGCTTCTGC TCCTCGGGCC TGCAGACCAT TGCCACCGCA
TCGCAGCGCA TCATCGCGGG CGAGGGCGAT GTCTACGTGG CCGGCGGCGT GGAGTCCATC
TCCTGCGTGC AGCAGGAAAT GAACCTGCAC ATGATCCAGG ACCTGGCCCT GGCCAAGCAA
AAGCCCGAGA TCTACTGGAG CATGCTGCAG ACCGCCGAAC AGGTCGCCAA GCGCTATGGC
ATCGGCCGTG ACGCCATGGA CGAATACGGC GCCGCCAGCC AGCAAAAGGC CTGCGCGGCC
CAGGCCGCCG GCCTGCTGGA TGCCGAGATC GCCCCCATCA CCGTGACCAT GGGCGTGGCC
GACAAGGTGC GCGGCCTGAT CACCAAGGAG GTGACCTGCA GCAAGGACGA GGGCGTGCGC
GAAGGCACGA CCAAGGAAGG CATCTCGGGC ATCCGCCCCG CGCTGCCCGG CGGCGTGATC
TCGGCCGGCA ATGCCAGCCA GTTCTCCGAT GGCGCAGGCG CCTGCGTGGT GGTCAGCGAG
GACTATGCCT CGCGCAACAA CCTCAAGCCT CTTGGCCGCT TCCTGGGCTT TGCCGTGGCC
GGCTGCGAGC CCGACGAAAT GGGCATCGGC CCCGTCTTCG CCGTGCCCAA GGTGCTCAAG
AAGCTGGGCC TGACGGTGCA GGACATCGAC CTGTGGGAGC TCAATGAAGC CTTTGCCGTG
CAGGTGCTGT ACTGCCGCGA CAAGCTGGGC ATCCCCAACG ACCGCCTCAA CGTCAACGGC
GGCGCCATCG CCCTGGGCCA TCCCTATGGC GTGTCGGGCC AGCGCCTGAC GGGCCACGCC
CTGATCGAAG GCAAGCGCCG CGGTGCCAAG CGTGTCTGCG TGACCATGTG CATCGGCGGC
GGCATGGGTG CCGCCGGCGT GTTCGAAGTG CTGTAA
 
Protein sequence
MTSAVIVSTA RTPLAKSWKG SFNMTHGATL GGHAVQHAVQ RAGIDPAAVD DVIMGCANPE 
GATGMNIARQ IALKAGLPIT ASGMTINRFC SSGLQTIATA SQRIIAGEGD VYVAGGVESI
SCVQQEMNLH MIQDLALAKQ KPEIYWSMLQ TAEQVAKRYG IGRDAMDEYG AASQQKACAA
QAAGLLDAEI APITVTMGVA DKVRGLITKE VTCSKDEGVR EGTTKEGISG IRPALPGGVI
SAGNASQFSD GAGACVVVSE DYASRNNLKP LGRFLGFAVA GCEPDEMGIG PVFAVPKVLK
KLGLTVQDID LWELNEAFAV QVLYCRDKLG IPNDRLNVNG GAIALGHPYG VSGQRLTGHA
LIEGKRRGAK RVCVTMCIGG GMGAAGVFEV L