Gene Daci_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3292 
Symbol 
ID5748877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3609541 
End bp3609738 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content68% 
IMG OID641298396 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_001564315 
Protein GI160898733 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.212717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA CCATCAACCA GCAAGCGACC GAACTGAGCG ACGGAGCCAC CGTGGCCGAC 
GCGCTGGCCC AGCTTGCGCC GCGCCCGCCC TTTGCCGTGG CCATCAACAC CGTCTTCGTG
CCCAAGGCCC GCTATGCCGA GCAGGCGCTG AACGACGGCG ACCGCCTCGA AGTGATCTCG
CCCGTGACCG GCGGCTGA
 
Protein sequence
MNITINQQAT ELSDGATVAD ALAQLAPRPP FAVAINTVFV PKARYAEQAL NDGDRLEVIS 
PVTGG