| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3205 |
|---|
| Symbol | |
|---|
| ID | 5748789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3523888 |
|---|
| End bp | 3524637 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641298308 |
|---|
| Product | ERF family protein |
|---|
| Protein accession | YP_001564228 |
|---|
| Protein GI | 160898646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.210814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAG CAACCGAAGA AATGACGCTC ATCGACGTTC CGGTGCAGCA ACAGGCCGTG
CCCGCAGTCC AGCAAGGCGG CGCGCTGGCT CCAAATTCCC CGGCCGCAAT GATGATGGCA
GCAATGAGCC AGGGCGCCAG CCTGGAGCAG GTCGAGAAGA TGATGGACCT TCAGGACCGC
TGGGAGAAGA AAGAGGCTGA GAAGGCCTAC AACGCGGCAT TCGCGGCATT CAAGTCCGAG
GCGGTGCGCA TCGTCCAGGG CCGCACAGTG ACGGATGGCC CGCTCAAGGG CCGCGCCTAC
GCCGAACTGC ATGACGTGGT GAAGGCTGTC ACTCCAGCCC TGTCGCGCCA TGGCCTTAGC
GCATCCTGGA GGCTTTCCAA GGACGAGCCC CAGTGGATCG AGATCACATG CGTTCTCAAA
CACATCGGTG GGCACTCCGA GTCCGTCAGC ATGGGTGGCG CGCCCGACAC AGGCGGCGCC
AAGAACCAAC TCCAGGCGCG CGCCAGTACC AAGTCCTACT TGGAGCGCTA CACGTTGAAG
GCCATCTGTG GCGTTGCCGA GGGTGGCGAT GACGACGACG GCGATGGCGG TGGCACTTCG
GATCTGGTGA GCGGCTGGGT GGACTATGCG CTGGCCCGAA AGGGCACGCC CGAATTCGAC
GCGGCTTGCA AGAAGGCGCG CGCGGAGTTC GACAAATCTC GAGACGTCGC CAGCCTGAAG
GCCTTCAACG CAGCAGTTGC AAAGGGCTGA
|
|---|
| Protein sequence | MNTATEEMTL IDVPVQQQAV PAVQQGGALA PNSPAAMMMA AMSQGASLEQ VEKMMDLQDR
WEKKEAEKAY NAAFAAFKSE AVRIVQGRTV TDGPLKGRAY AELHDVVKAV TPALSRHGLS
ASWRLSKDEP QWIEITCVLK HIGGHSESVS MGGAPDTGGA KNQLQARAST KSYLERYTLK
AICGVAEGGD DDDGDGGGTS DLVSGWVDYA LARKGTPEFD AACKKARAEF DKSRDVASLK
AFNAAVAKG
|
|---|
| |