| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3185 |
|---|
| Symbol | |
|---|
| ID | 5748769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3506157 |
|---|
| End bp | 3506888 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298288 |
|---|
| Product | glutamine amidotransferase class-I |
|---|
| Protein accession | YP_001564208 |
|---|
| Protein GI | 160898626 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.620946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTG TCGCCATCCT CCAGCACGAA TCCGCCCAGG GCCCCGGCGT TCTGCGTGAA
CACCTGGAGC AGCAGTGCAT TCCCTACCGA CTGTTGCAGC CCGCCCTCGA TGGCACAGCC
CCTGTGCACG CCGCCGATTA CAGCGGCATC GTGGTGCTGG GCAGCAACCA CAGCGTGAAC
GAGGGCCTGC CGTGGATGGA GGATGAACAG GCCCTGCTGG CCGATGCGCT GCGCAGCGAC
ATCCCCGTGC TCGGCCACTG CTTTGGCGCA CAGATGCTGG CGCGCGCCAT GGGCGCCAGG
GTCTGGCGCA ACCCCTGCCC CAACATTGGC TGGAGCCGCA TCTGGGTGAC GGCCGCCGCC
CAGCAGGTCA TGGACCTGCC GCGCGAGGCG ACGATCTTCC ATTGGCACTA CGACACCTTC
GAGATCCCGC GCGGCGCCGT GCGCACCATG TACGGCAGCC ACTGCCTGAA CAAGGGCTTT
CGCCACGGCC GGCACTGGGC CTTCCAGGGC CACATGGAAG TGACCGCCGC CAGCGTGGCC
GCCTGGTGCA CCGAAGGCCA TGACGAGCTG CTGCGCGCAC GCGGCCCCGC GGCGCAGACC
GAGAGCGAGA TCCTGCGCCA CCTGGACCTG CGCATTCCCG TGCTGAACGC CCTGGCCCAC
CGGACCTACC GGGCCTGGAC GGCACAGTTG CAGCGGCCGG TGGTCGTGAA CCTGGGCGTG
GCCAGCCGAT AG
|
|---|
| Protein sequence | MRPVAILQHE SAQGPGVLRE HLEQQCIPYR LLQPALDGTA PVHAADYSGI VVLGSNHSVN
EGLPWMEDEQ ALLADALRSD IPVLGHCFGA QMLARAMGAR VWRNPCPNIG WSRIWVTAAA
QQVMDLPREA TIFHWHYDTF EIPRGAVRTM YGSHCLNKGF RHGRHWAFQG HMEVTAASVA
AWCTEGHDEL LRARGPAAQT ESEILRHLDL RIPVLNALAH RTYRAWTAQL QRPVVVNLGV
ASR
|
|---|
| |