| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3167 |
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| Symbol | |
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| ID | 5748751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3484774 |
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| End bp | 3485679 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298270 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001564190 |
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| Protein GI | 160898608 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0129049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000238607 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGAAG CCAATCTATT CCAGGGCCAG CGCGTCCTGA TCACCGGGGG CGGCACGGGG
CTGGGCCTGG CCATGGCGGC CAAGCTGGCG GAGTTGGGTG CCGAGCTTCA CCTGTGCGGC
CGGCGGCATT CCGTGGTGCA GCAGGCCTGC GAGATGCTGA ACAACGACAC GGGCGCGCAG
GCCTTTGCGC ATGAACTCGA CATTCGCCAG CCCGAGGCCG TGCACACCGT CATCGACCGC
ATCTGGGCCG AACACGGACC CCTGACGGGC CTGGTCAACA ACGCGGCCGG CAACTTCGTC
AGCCGCACCG AGGACCTGAG CATCAACGGC TTCCATGCCA TATCGGACAT CGTCTTCCGG
GGCACCTTCT ACGTCACCCA GGCCGTGGGC CGCCGCTGGA TCGCCGAAGG GCTGCCGGGC
TCGGTGCTGT CCATCGTCGT CACCTGGGTG GACACGGGTT CGCCCTTTGT CGTGCCCTCG
GCCATGTCCA AGGCCGGGCT GGACGCCATG ACCAAATCGC TGGCCGTGGA ATGGGGTCCC
AAGCGCATAC GGTTCAACGC GATTGCGCCG GGCGTGATTC CCACCCAGGG CGCCAGCCAG
CGCCTGCGCC CCAGGATCGA CGGCAACGAG GACTCGGCCG ACCGCCGCCG CCTGGACAAC
CCCACGCGCC GCCTGGGCAC GGGCGAGGAC ATCGGCAACA TGGCCGCCTT CATCCTGGCC
CCGGGCAACA CCTGGCTCAA CGGCCAGACC ATCACGCTGG ACGGCGGCGA CGCCCTGGCC
AATGGCGCCT ACTTCACCGA ATACCAGGCC TGGGACGATG CCGACTGGGC GCGCGCCCGG
CAGATGGCCA AGGCCGCCAA CCAGCCCAAC GTCAACGATG GGGACCAGGA GGCCACGCCC
ACATGA
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| Protein sequence | MFEANLFQGQ RVLITGGGTG LGLAMAAKLA ELGAELHLCG RRHSVVQQAC EMLNNDTGAQ
AFAHELDIRQ PEAVHTVIDR IWAEHGPLTG LVNNAAGNFV SRTEDLSING FHAISDIVFR
GTFYVTQAVG RRWIAEGLPG SVLSIVVTWV DTGSPFVVPS AMSKAGLDAM TKSLAVEWGP
KRIRFNAIAP GVIPTQGASQ RLRPRIDGNE DSADRRRLDN PTRRLGTGED IGNMAAFILA
PGNTWLNGQT ITLDGGDALA NGAYFTEYQA WDDADWARAR QMAKAANQPN VNDGDQEATP
T
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