Gene Daci_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3162 
Symbol 
ID5748746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3479020 
End bp3480039 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID641298265 
Producthypothetical protein 
Protein accessionYP_001564185 
Protein GI160898603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000090078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCAT GCGAGAGAAG CCCTGTTATG CCTGAAGTTT GCCTAAGGAA GATGCAAAGC 
CATTTCATTG GCGGTGCGCA GCGCACGGTG CGGGATCTGC CGATCCAGCA CAGGGAAGTG
GTGCGCAATG GCGGCGAGCG GCCGCTGGAC ATGAATGGCA GCTATGCCGT GGGCCAGATG
TACGCCATGG AGTACCGGCT GGCGCGTCCG CGCAGCCCCC TGCCGGTGCT GCTGTGGCAC
GGCGGTGGCA TGACGGGTGC GCAGTGGGAG TCCACGCCCG ATGGCCGCCA GGGCTGGCTG
TGGCGCCTGC TGGAGGCCGG CCACGACGTG GTGGTCTGCG ATGCCGTGGA GCGCGGCCGC
GCGGGCTGGG CGATGTTCCC CGAGATCTAT GCCGAGGCGC CCGTGTTCCG CAGTGCCGAG
GAGGCGTGGA CGCTGTTCCG CATAGGCCAT GGCGCGCCTT CGTGCGACGG TGTGGGCGAG
CCCTTCGTTG GCCAGCGGTT TCCACATGAG AATTTTGGTG CCCTGGTGCG GCAGATGGTA
CCGCGCTGGC TGGGGCATGA GGCCATGACC ATGGCTGCCT ATGACGCCTT GCTGGAGCAG
TTCGGCCCCT GCGTGGTGCT GGGCCACAGC CAGGGCGGTG GCTTTGCCGC GCATGCGGCC
AGCCGCAAGC CGCACCTGGT GCGCGCCGTG GTGGGGGTGG AGCCTACGGG CATGCCGGTG
GTGCAAGAAG GGCAGCAGGG GCAACAGGGG CAGGAGGGGG CGGATGCCTT CGCGCCTGCC
TCGGCCATCC CCCATCTGGC GGTGTGGGGC GACCATTTCG CGCACAGCCC GCAGTGGCAG
AAGTACCGCG CGCAGACCGA TGTGTATTGG CAGCTGCTGC GCCGCCTTGG CGGCCGTGCC
GAGGTGCTGG ACCTGCCGGC CGCAGGCATT ACCGGCAATT CGCATTTCTG CATGCTGGAC
ACCAATGGCG ACGAGGTGCT GGGCCGGGTG CTGGCCTGGC TGGAGCGCCT GGGCCGATGA
 
Protein sequence
MAACERSPVM PEVCLRKMQS HFIGGAQRTV RDLPIQHREV VRNGGERPLD MNGSYAVGQM 
YAMEYRLARP RSPLPVLLWH GGGMTGAQWE STPDGRQGWL WRLLEAGHDV VVCDAVERGR
AGWAMFPEIY AEAPVFRSAE EAWTLFRIGH GAPSCDGVGE PFVGQRFPHE NFGALVRQMV
PRWLGHEAMT MAAYDALLEQ FGPCVVLGHS QGGGFAAHAA SRKPHLVRAV VGVEPTGMPV
VQEGQQGQQG QEGADAFAPA SAIPHLAVWG DHFAHSPQWQ KYRAQTDVYW QLLRRLGGRA
EVLDLPAAGI TGNSHFCMLD TNGDEVLGRV LAWLERLGR