Gene Daci_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3150 
Symbol 
ID5748734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3467197 
End bp3468285 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID641298253 
Productiron-enterobactin transporter periplasmic binding protein 
Protein accessionYP_001564173 
Protein GI160898591 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4592] ABC-type Fe2+-enterobactin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00953436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000531618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCTA CAATACGGAA TATGCTGGAG ACGCCGCCCT GGCGCCCGGC CCCGTCGCTT 
CGGATCGAGA TGAACAGACT CCAACTTGCC GCCCTGGGCG CGGCCGCCGC ACTGGCCGTA
CTGGCCTGTT TCGCATGGTT TCCACGCGCC GCCGTTCCCG TGGCGGGCGC CGCACCGCAT
ACGTCGGATA CATCGCATGC GTCGGATACA TCGGATACAT CGGATACATC GGATACGCCG
GCTGCAGCAC ACGCAGACCA TGCACCGCTG CCCCGGCGCA TCGTCTCCAC CTCGCCCAGC
GTGACCGGCA TCCTGCTGGC CATCGATGCG CCGGTCGTCG CGACCGCCGC GACCACGCCC
AGCCGTATGA CCGACGACAA GGGCTTTTTC TCGCAATGGG CCGCCGTTGC CGACAAGCGC
GGCGTGCAGG TGCTCTACCG CAACCTGCAA TTCGATATCG AGGCCGCCAT CGGCGCCAGC
CCCGACCTGC TGGTGGCCTC CGCCACCGGG GCCGACAGCG TGGCCCAGCA CCGCACCGAA
CTGCAGGCGC AGGGCGTGCC CATGGTCGTG GTCGACTACT CCAGCCAGTC CTGGCAGGAC
ATCGCCACCG AGCTGGGCCG CATCACGGGC CATGCGAAGC AGGCCGCAGC AGCCATTGCC
CGCTTCGATG CCCATGTGGC GCAGACCGCC GCCTCCATCA CGCCACCGGC CCAGCCCGTC
AGCATCGTCG CCTACAACCT GGCCGGCAGC TACTCCATAG GCCGCGCCGC CAGCCCCCAT
GCGCGGCTGC TGGCCGCGCT GGGCTTCAAG GTGGAGGGCC TGCCGCCCGC GCTGGCCGCC
CAGGTCACAC GCGCCTCGGA CTTCGAATTC ATCTCCCGCG AGAATCTCTC GGCCGCCATC
ACCGGCGACT CCGTCTTCCT GCTCGGCGCC TCGCAGGGCG ATGTGCAGGC CTTCCTGGAC
GATCCGCTGC TGGCCAACCT GCCCGCCGTT GCCGGGCGGC GCGTCTATCC GCTGGGCCCG
ACCTCGTTTC GCATCGACTA CTACTCGGGG CAGCAGATGG TCGACGCCGT GGCAAGCCAT
TTCCGCTGA
 
Protein sequence
MNSTIRNMLE TPPWRPAPSL RIEMNRLQLA ALGAAAALAV LACFAWFPRA AVPVAGAAPH 
TSDTSHASDT SDTSDTSDTP AAAHADHAPL PRRIVSTSPS VTGILLAIDA PVVATAATTP
SRMTDDKGFF SQWAAVADKR GVQVLYRNLQ FDIEAAIGAS PDLLVASATG ADSVAQHRTE
LQAQGVPMVV VDYSSQSWQD IATELGRITG HAKQAAAAIA RFDAHVAQTA ASITPPAQPV
SIVAYNLAGS YSIGRAASPH ARLLAALGFK VEGLPPALAA QVTRASDFEF ISRENLSAAI
TGDSVFLLGA SQGDVQAFLD DPLLANLPAV AGRRVYPLGP TSFRIDYYSG QQMVDAVASH
FR