Gene Daci_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3139 
Symbol 
ID5748723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3456042 
End bp3457025 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID641298242 
Producthypothetical protein 
Protein accessionYP_001564162 
Protein GI160898580 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.797456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0139946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCGT CCCATCCCTT CCGCCGCCGC ACCCTGCTGG CCCTGGCCGG CGCATCGCTG 
GGGGCCGCTG CCCTGGGCGT GCGCGCCCAA AATGGCACGC CGCTGCGCGT CATCCTGCCC
GTGGGGGCAG GCTCGGGCGC CGACACCATC GTGCGCTCGG CCCAGACCGC GCTGGTGCGC
TCGCTGGGCG GCCAGCCCGT GGTCATGGAG AACCTGCCGG GCGCGGGCGG CATCACGGGA
ACGCAGATGC TGGTCAAGGC GCCGGCCGAT GGCAACACCA TCGCCTTCAT CTCCAACAAC
CACGCCGTCA ACCCCAGCGT CTTCAAGAAG CTGCCCTACG ACAGCCTGGC CGACATCACG
CCGCTGTCCA TCGTCGGCGG CTCTCCCTTC GTGCTGGTCG TCCACCCCAA GGTGGCGGCG
CGCAATGCGC GCGAACTGCA GGCGCTCATG AAGGCGCGGC CCGGCGACCT CAACTACGCC
TCGTCCGGCA ACGGCACCAT CTTCCACCTC GCGGCCGAAG TCTTTCTGGA CGCGGCCGGC
ACCACGGCAC GCCACATTCC CTACAAGGGC GTGGGCCAGA TGGTGGTGGA CCTGCTCAGC
GGGCAGGTGG ACTTCGGCGT GATCGCCGTG GGCACGGCGC AGGCGCACCT CAAATCCGGC
GCGCTGCGTG CCATCGGCAT CATGGGCCGC GAGCGCGTGG CATCGCTGCC CGATGTGCCC
ACCGTGGCAG AGCAGGGCTT TCCCGGCGTG GACATCGCCG GCTGGGTGGC CGCCATAGGC
CCCAAGGGCA TGCCGCCCGC CCAGGTGCGC CGCCTGCACG ACGGCATCGC CACCGCCTTT
GCCGACCCCG AGGTCAAGGC CGGCTTTGCT CGGCGCGACG AATACACCGT GCTCAACAGC
CCCGAGGCGG CAGCCCAGTT CCTGCGCTCC GAGCAGGAAC GCTTTGCGCG CCTGGTCAAG
AAGGCCAATG TCGTGTTGGA GTAA
 
Protein sequence
MHSSHPFRRR TLLALAGASL GAAALGVRAQ NGTPLRVILP VGAGSGADTI VRSAQTALVR 
SLGGQPVVME NLPGAGGITG TQMLVKAPAD GNTIAFISNN HAVNPSVFKK LPYDSLADIT
PLSIVGGSPF VLVVHPKVAA RNARELQALM KARPGDLNYA SSGNGTIFHL AAEVFLDAAG
TTARHIPYKG VGQMVVDLLS GQVDFGVIAV GTAQAHLKSG ALRAIGIMGR ERVASLPDVP
TVAEQGFPGV DIAGWVAAIG PKGMPPAQVR RLHDGIATAF ADPEVKAGFA RRDEYTVLNS
PEAAAQFLRS EQERFARLVK KANVVLE