Gene Daci_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3133 
Symbol 
ID5748717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3450867 
End bp3451181 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID641298236 
Productpentapeptide MXKDX repeat-containing protein 
Protein accessionYP_001564156 
Protein GI160898574 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.821574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.206734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC TCACCACCAC CCTGCTCGCC ACCTGCCTCG CCCTGGCCGG TGCCACCACG 
GCATTCGCTG CGGATGAGAT GGCGAAGGAC GGCATGTCCA ACGGAGCCAT GTCCAAGGAT
TCGATGTCCA AGGACGGAAT GAAGAAGGAC TCCATGGCCA AGGACGGCAT GAAGAAAGAC
TCCATGTCCA AGGACGGGAT GAAGAAGGAC TCGATGTCCA AGGACGGCAT GCACAAGGAT
GGCATGCACA AGGACGGCAT GTCCAAGGAT GGAATGAAGA AGGATTCCAT GGGCAAGGAC
GCCATGTCCA AATAA
 
Protein sequence
MTKLTTTLLA TCLALAGATT AFAADEMAKD GMSNGAMSKD SMSKDGMKKD SMAKDGMKKD 
SMSKDGMKKD SMSKDGMHKD GMHKDGMSKD GMKKDSMGKD AMSK