| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3130 |
|---|
| Symbol | |
|---|
| ID | 5748714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3447577 |
|---|
| End bp | 3448374 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641298233 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001564153 |
|---|
| Protein GI | 160898571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.228068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.554977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC TCGGCTCCGC TGGCACTCTC GAAGTCTTTG TCAGAGCCCC CATCCAGCCG
GAATTTGTGG ATTTGGTGGC GGATGCGCGC GCAGCCATCG CCAGCGACCT CGGCGAGGCG
CTGGACAGCC TCTACCTGTA TGGCAGCGTG GCGCGCGGCT GCGCGAGGGC GGGCTTCTCC
GACCTGGACC TGACGGTGGT GCTGGTGCGC TCCCTTAGTG GACAGGAGTG CGCCCGGCTG
GAGCAACTGC GCCAGGACCT GCAACTACGT CACAAAGAAG TCGTGAAGAT CGATTTCGAC
CTGGGCACTC GGCAAGAGGT GCTGGACCCG GCCCATCTCT ACAGCTGGGG CTACTGGCTC
AAGCATGAGT GCCGCTGTAT CCATGGAGAA GACCTGGCGC AGCAGTTTGA GGCGTTCGAG
CCGTCCAGGG CGATTGCACA GGCCGTCAAT GGCGACTACG TGCAGGTGCT GAACGACTAC
CTGCAGCGCA TTGCTGCAAC CCGGGACGAC TCGGAGGCCC TGCGCCTGCA ACGCGAAGCC
GCACGCAAGC TGATCCGGGC CACCAATGTG CTGCGCCCCT GCTCAGGGGG TTTCTGGCCG
CGCACGCTGG AGGAGTTCGC CGGATGTTTT TCAGAGCGCC ACCCGGAATT GGCAGAGTCC
ATCGATTTCT TCCTGATCCA GGCCAGGGCA CCGTGTATGC CCAAAACACT CTTCAGTGCC
CGGCTTTCCA GCTTTCTGGA ATGGTTGCAC CGGCAGCAGC AGTTGCTGGC ATCGGAGCTG
GATCCATCGG TCCCGTGA
|
|---|
| Protein sequence | MNNLGSAGTL EVFVRAPIQP EFVDLVADAR AAIASDLGEA LDSLYLYGSV ARGCARAGFS
DLDLTVVLVR SLSGQECARL EQLRQDLQLR HKEVVKIDFD LGTRQEVLDP AHLYSWGYWL
KHECRCIHGE DLAQQFEAFE PSRAIAQAVN GDYVQVLNDY LQRIAATRDD SEALRLQREA
ARKLIRATNV LRPCSGGFWP RTLEEFAGCF SERHPELAES IDFFLIQARA PCMPKTLFSA
RLSSFLEWLH RQQQLLASEL DPSVP
|
|---|
| |