Gene Daci_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3127 
Symbol 
ID5748711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3444678 
End bp3445769 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content66% 
IMG OID641298230 
Producthypothetical protein 
Protein accessionYP_001564150 
Protein GI160898568 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.21286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATGGC CGATCGCTGA TTCGGTATTG GACAGTATGG GGAGGGCACT CGAGAATGGT 
TTGCACAACC CCTGCCATCG CAGCCACGAC GCATTCAGGA GGAGACAGGC CATGCATTCA
CTCATCACGC GGATCGCGCG GATCATCGGT GTCTGGGCCT GCGCGCTGGT GCCGCTGTGC
GGCGCTGCGC AGGCCTTTCC GGACAGGCCT GTCACCCTGG TCCTGGCCTA CTCCGCAGGG
AGCATCTCCG ACGTTCTCGC ACGCAGCGTG GCCCAGCAGT TGAGCGCCCG GTGGAAGCAG
CCGGTGCTGG TCGACAACCG GCCCGGGGGC AACCAGATCA TCGCGGCCAG CCTCGTGGCC
AAGGCCGCCG CCGATGGCTA CACCCTGCTG CTGTGCGATG ACGGCGTCTT CACGCTCAAC
CCGCATCTGT TCCGCAAGCT GCCCTATTCG CTGGAGGACT TCGCGCCGGT CGCGGATCTT
GCGCAGTTGC AGATGGTGCT GTCCAGCGCG AGGCAGGTGC CCGCTGCCAG CATCGCTGAA
CTGGTGGCCC TGGCCAGGGC CAGGCCGGGC ACGCTGAACT ATGGCTCGTT CGGCACGGGG
AACATCGTCC ACCTGGCCAT GGATGCGTTT TCCCGGATGG CTGCCATCGA GTTGGTGCAC
GTGCCCTACA AGGGCTATCC CGACGCCATC CGTGATGTTC TGGCCAACCA GGTCCAACTG
GTGCTGGGCG GCATTGGCGG GCCGGCGCTT CAGTATTTGA AAAGCGGCGC CATGAGGCCG
CTGGCCGTCA CGGGTCCATC GCGCAGCCCC TTGCTGCCGG ATGTGCCCAC CCTGGCCGAA
GCAGGCTTTG CGCGGCTCGA CCCGCAAGTC AATTTCATCC TCATGGCGCC TGCGGGCACG
CCGCCAGCCG TGGTGCGCAA AATCAATGCA GCCGCCGCTG TCATCGTCCG GCAGGAGATT
GCGGCCACGG TGCTTGCGCC CAACGGCATG AGACCGCTGG GCGCAAGCCC GGACGCCCTG
GCGGCCTCGC TCAGGCAGGG CAGGGCCGCA TATGCCGAAC TCGTGAAATC GTCTGGCGTC
AGGCTGGACT AG
 
Protein sequence
MVWPIADSVL DSMGRALENG LHNPCHRSHD AFRRRQAMHS LITRIARIIG VWACALVPLC 
GAAQAFPDRP VTLVLAYSAG SISDVLARSV AQQLSARWKQ PVLVDNRPGG NQIIAASLVA
KAAADGYTLL LCDDGVFTLN PHLFRKLPYS LEDFAPVADL AQLQMVLSSA RQVPAASIAE
LVALARARPG TLNYGSFGTG NIVHLAMDAF SRMAAIELVH VPYKGYPDAI RDVLANQVQL
VLGGIGGPAL QYLKSGAMRP LAVTGPSRSP LLPDVPTLAE AGFARLDPQV NFILMAPAGT
PPAVVRKINA AAAVIVRQEI AATVLAPNGM RPLGASPDAL AASLRQGRAA YAELVKSSGV
RLD